Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.9□□□□□ -0.18
COLCA2A8K830 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC13.9□□□□□ -0.18
COLCA2A8K830 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.9□□□□□ -0.18
COLCA2A8K830 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.9□□□□□ -0.18
COLCA2A8K830 AC103834.1-201ENST00000520383 144 ntBASIC13.9□□□□□ -0.18
COLCA2A8K830 AC136469.2-201ENST00000623944 1028 ntBASIC13.9□□□□□ -0.18
COLCA2A8K830 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.9□□□□□ -0.18
COLCA2A8K830 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.9□□□□□ -0.18
COLCA2A8K830 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.9□□□□□ -0.18
COLCA2A8K830 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.9□□□□□ -0.18
COLCA2A8K830 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COLCA2A8K830 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
COLCA2A8K830 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
COLCA2A8K830 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
COLCA2A8K830 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.9□□□□□ -0.19
COLCA2A8K830 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
COLCA2A8K830 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.89□□□□□ -0.19
COLCA2A8K830 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.89□□□□□ -0.19
COLCA2A8K830 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.89□□□□□ -0.19
COLCA2A8K830 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.89□□□□□ -0.19
COLCA2A8K830 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
COLCA2A8K830 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
COLCA2A8K830 PTCHD3P2-201ENST00000424937 1205 ntBASIC13.89□□□□□ -0.19
COLCA2A8K830 CDV3P1-201ENST00000471403 739 ntBASIC13.89□□□□□ -0.19
COLCA2A8K830 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
COLCA2A8K830 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.89□□□□□ -0.19
COLCA2A8K830 AC068587.9-201ENST00000641814 219 ntBASIC13.89□□□□□ -0.19
COLCA2A8K830 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.89□□□□□ -0.19
COLCA2A8K830 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
COLCA2A8K830 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.89□□□□□ -0.19
COLCA2A8K830 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.89□□□□□ -0.19
COLCA2A8K830 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.89□□□□□ -0.19
COLCA2A8K830 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
COLCA2A8K830 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
COLCA2A8K830 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
COLCA2A8K830 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COLCA2A8K830 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.88□□□□□ -0.19
COLCA2A8K830 AC138035.3-201ENST00000622706 2791 ntBASIC13.88□□□□□ -0.19
COLCA2A8K830 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 TFP1-202ENST00000475455 1573 ntBASIC13.88□□□□□ -0.19
COLCA2A8K830 RCC2P6-201ENST00000526625 1557 ntBASIC13.88□□□□□ -0.19
COLCA2A8K830 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
COLCA2A8K830 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
COLCA2A8K830 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
COLCA2A8K830 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.88□□□□□ -0.19
COLCA2A8K830 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.88□□□□□ -0.19
COLCA2A8K830 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC13.88□□□□□ -0.19
COLCA2A8K830 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC13.88□□□□□ -0.19
COLCA2A8K830 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 SLC7A5P2-201ENST00000553010 536 ntBASIC13.88□□□□□ -0.19
COLCA2A8K830 AL138724.1-201ENST00000606771 1088 ntBASIC13.88□□□□□ -0.19
COLCA2A8K830 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
COLCA2A8K830 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
COLCA2A8K830 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COLCA2A8K830 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms