Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 PKD1P6-201ENST00000343738 4769 ntBASIC26.65■■□□□ 1.86
HFM1A2PYH4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
HFM1A2PYH4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
HFM1A2PYH4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
HFM1A2PYH4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC26.64■■□□□ 1.86
HFM1A2PYH4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC26.64■■□□□ 1.86
HFM1A2PYH4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
HFM1A2PYH4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
HFM1A2PYH4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
HFM1A2PYH4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC26.64■■□□□ 1.85
HFM1A2PYH4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
HFM1A2PYH4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
HFM1A2PYH4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC26.64■■□□□ 1.85
HFM1A2PYH4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC26.64■■□□□ 1.85
HFM1A2PYH4 AL121912.1-201ENST00000603683 238 ntBASIC26.64■■□□□ 1.85
HFM1A2PYH4 AL591684.3-201ENST00000605187 298 ntBASIC26.64■■□□□ 1.85
HFM1A2PYH4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HFM1A2PYH4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
HFM1A2PYH4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC26.63■■□□□ 1.85
HFM1A2PYH4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
HFM1A2PYH4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
HFM1A2PYH4 ABALON-201ENST00000629058 1903 ntBASIC26.63■■□□□ 1.85
HFM1A2PYH4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
HFM1A2PYH4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
HFM1A2PYH4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HFM1A2PYH4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HFM1A2PYH4 HLA-DQB1-201ENST00000374943 1656 ntBASIC26.63■■□□□ 1.85
HFM1A2PYH4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HFM1A2PYH4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HFM1A2PYH4 AC122714.2-201ENST00000502787 707 ntBASIC26.63■■□□□ 1.85
HFM1A2PYH4 AP002469.2-201ENST00000531724 424 ntBASIC26.63■■□□□ 1.85
HFM1A2PYH4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC26.63■■□□□ 1.85
HFM1A2PYH4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
HFM1A2PYH4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HFM1A2PYH4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HFM1A2PYH4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HFM1A2PYH4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
HFM1A2PYH4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC26.62■■□□□ 1.85
HFM1A2PYH4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
HFM1A2PYH4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC26.62■■□□□ 1.85
HFM1A2PYH4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC26.62■■□□□ 1.85
HFM1A2PYH4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
HFM1A2PYH4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HFM1A2PYH4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC26.62■■□□□ 1.85
HFM1A2PYH4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HFM1A2PYH4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HFM1A2PYH4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HFM1A2PYH4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC26.62■■□□□ 1.85
HFM1A2PYH4 FAM220CP-201ENST00000395253 831 ntBASIC26.62■■□□□ 1.85
HFM1A2PYH4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
HFM1A2PYH4 RBM17P3-201ENST00000417687 1192 ntBASIC26.62■■□□□ 1.85
HFM1A2PYH4 KRT8P10-201ENST00000450021 1447 ntBASIC26.62■■□□□ 1.85
HFM1A2PYH4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
HFM1A2PYH4 SLC25A6P4-201ENST00000586535 553 ntBASIC26.62■■□□□ 1.85
HFM1A2PYH4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
HFM1A2PYH4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC26.62■■□□□ 1.85
HFM1A2PYH4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC26.62■■□□□ 1.85
HFM1A2PYH4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
HFM1A2PYH4 KRT18P55-202ENST00000578578 1546 ntBASIC26.62■■□□□ 1.85
HFM1A2PYH4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HFM1A2PYH4 AC135050.7-201ENST00000624508 2218 ntBASIC26.62■■□□□ 1.85
HFM1A2PYH4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
HFM1A2PYH4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC26.61■■□□□ 1.85
HFM1A2PYH4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
HFM1A2PYH4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HFM1A2PYH4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
HFM1A2PYH4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HFM1A2PYH4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC26.61■■□□□ 1.85
HFM1A2PYH4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
HFM1A2PYH4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HFM1A2PYH4 FGFR3P6-201ENST00000457012 610 ntBASIC26.61■■□□□ 1.85
HFM1A2PYH4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC26.61■■□□□ 1.85
HFM1A2PYH4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC26.61■■□□□ 1.85
HFM1A2PYH4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms