Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 AL136379.1-201ENST00000623471 2642 ntBASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 KRT16P5-201ENST00000455284 522 ntBASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 AC063926.3-201ENST00000624734 5658 ntBASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 AC134043.2-201ENST00000624206 2238 ntBASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 AC133681.1-201ENST00000465482 601 ntBASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 AC233263.1-201ENST00000578059 224 ntBASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV8-6A0A0B4J262 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV8-6A0A0B4J262 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms