Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-2A0A0B4J237 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-2A0A0B4J237 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRAV8-2A0A0B4J237 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-2A0A0B4J237 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRAV8-2A0A0B4J237 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-2A0A0B4J237 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-2A0A0B4J237 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-2A0A0B4J237 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV8-2A0A0B4J237 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
TRAV8-2A0A0B4J237 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV8-2A0A0B4J237 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 AL355075.4-201ENST00000554988 638 ntBASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 AC112497.1-201ENST00000624824 639 ntBASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 TMEM191A-211ENST00000637163 1067 ntBASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 LINC01126-201ENST00000623515 1646 ntBASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV8-2A0A0B4J237 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV8-2A0A0B4J237 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV8-2A0A0B4J237 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV8-2A0A0B4J237 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 INGX-201ENST00000359239 846 ntBASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 AC093010.1-201ENST00000473625 1624 ntBASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 AC104390.1-201ENST00000555663 520 ntBASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 C2orf69P3-201ENST00000565542 1120 ntBASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 LINC00896-202ENST00000609602 2128 ntBASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRAV8-2A0A0B4J237 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRAV8-2A0A0B4J237 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-2A0A0B4J237 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV8-2A0A0B4J237 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV8-2A0A0B4J237 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-2A0A0B4J237 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-2A0A0B4J237 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV8-2A0A0B4J237 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-2A0A0B4J237 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-2A0A0B4J237 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV8-2A0A0B4J237 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms