Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.31■■□□□ 1.8
HCFC2Q9Y5Z7 MIR6765-201ENST00000614092 87 ntBASIC26.31■■□□□ 1.8
HCFC2Q9Y5Z7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HCFC2Q9Y5Z7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HCFC2Q9Y5Z7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
HCFC2Q9Y5Z7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.3■■□□□ 1.8
HCFC2Q9Y5Z7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.29■■□□□ 1.8
HCFC2Q9Y5Z7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.29■■□□□ 1.8
HCFC2Q9Y5Z7 AC139795.1-202ENST00000500444 432 ntBASIC26.29■■□□□ 1.8
HCFC2Q9Y5Z7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HCFC2Q9Y5Z7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.29■■□□□ 1.8
HCFC2Q9Y5Z7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
HCFC2Q9Y5Z7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HCFC2Q9Y5Z7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HCFC2Q9Y5Z7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HCFC2Q9Y5Z7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HCFC2Q9Y5Z7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
HCFC2Q9Y5Z7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HCFC2Q9Y5Z7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.27■■□□□ 1.8
HCFC2Q9Y5Z7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.27■■□□□ 1.8
HCFC2Q9Y5Z7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HCFC2Q9Y5Z7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.26■■□□□ 1.79
HCFC2Q9Y5Z7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HCFC2Q9Y5Z7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HCFC2Q9Y5Z7 AC009299.2-201ENST00000482477 511 ntBASIC26.26■■□□□ 1.79
HCFC2Q9Y5Z7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.26■■□□□ 1.79
HCFC2Q9Y5Z7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
HCFC2Q9Y5Z7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
HCFC2Q9Y5Z7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HCFC2Q9Y5Z7 AC103834.1-201ENST00000520383 144 ntBASIC26.25■■□□□ 1.79
HCFC2Q9Y5Z7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.25■■□□□ 1.79
HCFC2Q9Y5Z7 ABCB10P3-201ENST00000561950 2166 ntBASIC26.24■■□□□ 1.79
HCFC2Q9Y5Z7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
HCFC2Q9Y5Z7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
HCFC2Q9Y5Z7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HCFC2Q9Y5Z7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HCFC2Q9Y5Z7 YBX1P4-201ENST00000392794 808 ntBASIC26.24■■□□□ 1.79
HCFC2Q9Y5Z7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.24■■□□□ 1.79
HCFC2Q9Y5Z7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
HCFC2Q9Y5Z7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HCFC2Q9Y5Z7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HCFC2Q9Y5Z7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.23■■□□□ 1.79
HCFC2Q9Y5Z7 AC018755.3-202ENST00000596210 929 ntBASIC26.23■■□□□ 1.79
HCFC2Q9Y5Z7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.23■■□□□ 1.79
HCFC2Q9Y5Z7 PVT1_1.1-201ENST00000615125 194 ntBASIC26.23■■□□□ 1.79
HCFC2Q9Y5Z7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.23■■□□□ 1.79
HCFC2Q9Y5Z7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
HCFC2Q9Y5Z7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HCFC2Q9Y5Z7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HCFC2Q9Y5Z7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HCFC2Q9Y5Z7 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.22■■□□□ 1.79
HCFC2Q9Y5Z7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
HCFC2Q9Y5Z7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.22■■□□□ 1.79
HCFC2Q9Y5Z7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HCFC2Q9Y5Z7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HCFC2Q9Y5Z7 AL592295.1-201ENST00000400984 884 ntBASIC26.21■■□□□ 1.79
HCFC2Q9Y5Z7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
HCFC2Q9Y5Z7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.2■■□□□ 1.78
HCFC2Q9Y5Z7 AL139393.2-201ENST00000608721 2025 ntBASIC26.2■■□□□ 1.78
HCFC2Q9Y5Z7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HCFC2Q9Y5Z7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HCFC2Q9Y5Z7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HCFC2Q9Y5Z7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HCFC2Q9Y5Z7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.19■■□□□ 1.78
HCFC2Q9Y5Z7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
HCFC2Q9Y5Z7 AP002414.2-202ENST00000590929 1450 ntBASIC26.18■■□□□ 1.78
HCFC2Q9Y5Z7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.18■■□□□ 1.78
HCFC2Q9Y5Z7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.18■■□□□ 1.78
HCFC2Q9Y5Z7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
HCFC2Q9Y5Z7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
HCFC2Q9Y5Z7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
HCFC2Q9Y5Z7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.17■■□□□ 1.78
HCFC2Q9Y5Z7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.17■■□□□ 1.78
HCFC2Q9Y5Z7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.17■■□□□ 1.78
HCFC2Q9Y5Z7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.17■■□□□ 1.78
HCFC2Q9Y5Z7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
HCFC2Q9Y5Z7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
HCFC2Q9Y5Z7 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.15■■□□□ 1.78
HCFC2Q9Y5Z7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
HCFC2Q9Y5Z7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
HCFC2Q9Y5Z7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.14■■□□□ 1.78
HCFC2Q9Y5Z7 MIR4508-201ENST00000584178 70 ntBASIC26.14■■□□□ 1.78
HCFC2Q9Y5Z7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
HCFC2Q9Y5Z7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
HCFC2Q9Y5Z7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
HCFC2Q9Y5Z7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.13■■□□□ 1.77
HCFC2Q9Y5Z7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.13■■□□□ 1.77
HCFC2Q9Y5Z7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
HCFC2Q9Y5Z7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
HCFC2Q9Y5Z7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.12■■□□□ 1.77
HCFC2Q9Y5Z7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
HCFC2Q9Y5Z7 GUSBP5-201ENST00000418136 578 ntBASIC26.11■■□□□ 1.77
HCFC2Q9Y5Z7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
HCFC2Q9Y5Z7 AL359504.2-201ENST00000605506 1601 ntBASIC26.1■■□□□ 1.77
HCFC2Q9Y5Z7 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.1■■□□□ 1.77
HCFC2Q9Y5Z7 AC131212.1-201ENST00000613771 668 ntBASIC26.1■■□□□ 1.77
HCFC2Q9Y5Z7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
HCFC2Q9Y5Z7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.09■■□□□ 1.77
HCFC2Q9Y5Z7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
HCFC2Q9Y5Z7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms