Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHB7Q9Y5E2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHB7Q9Y5E2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHB7Q9Y5E2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.93■■□□□ 1.9
PCDHB7Q9Y5E2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
PCDHB7Q9Y5E2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.93■■□□□ 1.9
PCDHB7Q9Y5E2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
PCDHB7Q9Y5E2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHB7Q9Y5E2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.9■■□□□ 1.9
PCDHB7Q9Y5E2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.9■■□□□ 1.9
PCDHB7Q9Y5E2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.9■■□□□ 1.9
PCDHB7Q9Y5E2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHB7Q9Y5E2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.9■■□□□ 1.9
PCDHB7Q9Y5E2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
PCDHB7Q9Y5E2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHB7Q9Y5E2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHB7Q9Y5E2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHB7Q9Y5E2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.89■■□□□ 1.9
PCDHB7Q9Y5E2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.89■■□□□ 1.9
PCDHB7Q9Y5E2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHB7Q9Y5E2 SPCS2P3-201ENST00000500401 656 ntBASIC26.88■■□□□ 1.89
PCDHB7Q9Y5E2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.88■■□□□ 1.89
PCDHB7Q9Y5E2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHB7Q9Y5E2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHB7Q9Y5E2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHB7Q9Y5E2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHB7Q9Y5E2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.87■■□□□ 1.89
PCDHB7Q9Y5E2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
PCDHB7Q9Y5E2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHB7Q9Y5E2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHB7Q9Y5E2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHB7Q9Y5E2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
PCDHB7Q9Y5E2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.86■■□□□ 1.89
PCDHB7Q9Y5E2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHB7Q9Y5E2 MIR6765-201ENST00000614092 87 ntBASIC26.85■■□□□ 1.89
PCDHB7Q9Y5E2 AC074183.2-201ENST00000623112 922 ntBASIC26.85■■□□□ 1.89
PCDHB7Q9Y5E2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHB7Q9Y5E2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHB7Q9Y5E2 AC010980.1-201ENST00000587192 1142 ntBASIC26.84■■□□□ 1.89
PCDHB7Q9Y5E2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHB7Q9Y5E2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHB7Q9Y5E2 ABCB10P1-201ENST00000614297 2181 ntBASIC26.84■■□□□ 1.89
PCDHB7Q9Y5E2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
PCDHB7Q9Y5E2 AC139795.1-202ENST00000500444 432 ntBASIC26.83■■□□□ 1.89
PCDHB7Q9Y5E2 AC018755.3-202ENST00000596210 929 ntBASIC26.83■■□□□ 1.89
PCDHB7Q9Y5E2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.83■■□□□ 1.89
PCDHB7Q9Y5E2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHB7Q9Y5E2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.82■■□□□ 1.88
PCDHB7Q9Y5E2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.82■■□□□ 1.88
PCDHB7Q9Y5E2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.82■■□□□ 1.88
PCDHB7Q9Y5E2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHB7Q9Y5E2 AL359504.2-201ENST00000605506 1601 ntBASIC26.82■■□□□ 1.88
PCDHB7Q9Y5E2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
PCDHB7Q9Y5E2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.82■■□□□ 1.88
PCDHB7Q9Y5E2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHB7Q9Y5E2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.81■■□□□ 1.88
PCDHB7Q9Y5E2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHB7Q9Y5E2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHB7Q9Y5E2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.81■■□□□ 1.88
PCDHB7Q9Y5E2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHB7Q9Y5E2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.8■■□□□ 1.88
PCDHB7Q9Y5E2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHB7Q9Y5E2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHB7Q9Y5E2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHB7Q9Y5E2 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.79■■□□□ 1.88
PCDHB7Q9Y5E2 AL035685.1-201ENST00000636663 812 ntBASIC26.79■■□□□ 1.88
PCDHB7Q9Y5E2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHB7Q9Y5E2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.78■■□□□ 1.88
PCDHB7Q9Y5E2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHB7Q9Y5E2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.78■■□□□ 1.88
PCDHB7Q9Y5E2 AL451085.2-201ENST00000605085 799 ntBASIC26.78■■□□□ 1.88
PCDHB7Q9Y5E2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.78■■□□□ 1.88
PCDHB7Q9Y5E2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.78■■□□□ 1.88
PCDHB7Q9Y5E2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHB7Q9Y5E2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHB7Q9Y5E2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.77■■□□□ 1.88
PCDHB7Q9Y5E2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHB7Q9Y5E2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHB7Q9Y5E2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDHB7Q9Y5E2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDHB7Q9Y5E2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHB7Q9Y5E2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHB7Q9Y5E2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHB7Q9Y5E2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHB7Q9Y5E2 KRT8P33-201ENST00000508125 1423 ntBASIC26.76■■□□□ 1.87
PCDHB7Q9Y5E2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHB7Q9Y5E2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHB7Q9Y5E2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.76■■□□□ 1.87
PCDHB7Q9Y5E2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
PCDHB7Q9Y5E2 WHAMMP3-201ENST00000611636 1609 ntBASIC26.76■■□□□ 1.87
PCDHB7Q9Y5E2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHB7Q9Y5E2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHB7Q9Y5E2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.75■■□□□ 1.87
PCDHB7Q9Y5E2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHB7Q9Y5E2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHB7Q9Y5E2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHB7Q9Y5E2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
PCDHB7Q9Y5E2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.73■■□□□ 1.87
PCDHB7Q9Y5E2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
PCDHB7Q9Y5E2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms