Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
KDM3AQ9Y4C1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
KDM3AQ9Y4C1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
KDM3AQ9Y4C1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
KDM3AQ9Y4C1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
KDM3AQ9Y4C1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.95■■■□□ 2.07
KDM3AQ9Y4C1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
KDM3AQ9Y4C1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
KDM3AQ9Y4C1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
KDM3AQ9Y4C1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.95■■■□□ 2.06
KDM3AQ9Y4C1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
KDM3AQ9Y4C1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
KDM3AQ9Y4C1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.93■■■□□ 2.06
KDM3AQ9Y4C1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
KDM3AQ9Y4C1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.93■■■□□ 2.06
KDM3AQ9Y4C1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
KDM3AQ9Y4C1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
KDM3AQ9Y4C1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
KDM3AQ9Y4C1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.93■■■□□ 2.06
KDM3AQ9Y4C1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.93■■■□□ 2.06
KDM3AQ9Y4C1 WHAMMP3-201ENST00000611636 1609 ntBASIC27.92■■■□□ 2.06
KDM3AQ9Y4C1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
KDM3AQ9Y4C1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
KDM3AQ9Y4C1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
KDM3AQ9Y4C1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
KDM3AQ9Y4C1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
KDM3AQ9Y4C1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
KDM3AQ9Y4C1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
KDM3AQ9Y4C1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
KDM3AQ9Y4C1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
KDM3AQ9Y4C1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.9■■■□□ 2.06
KDM3AQ9Y4C1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
KDM3AQ9Y4C1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
KDM3AQ9Y4C1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.89■■■□□ 2.05
KDM3AQ9Y4C1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.05
KDM3AQ9Y4C1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
KDM3AQ9Y4C1 AL121749.1-202ENST00000609313 2153 ntBASIC27.88■■■□□ 2.05
KDM3AQ9Y4C1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
KDM3AQ9Y4C1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.88■■■□□ 2.05
KDM3AQ9Y4C1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
KDM3AQ9Y4C1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
KDM3AQ9Y4C1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
KDM3AQ9Y4C1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
KDM3AQ9Y4C1 AC092296.2-201ENST00000589470 999 ntBASIC27.87■■■□□ 2.05
KDM3AQ9Y4C1 NTF6A-201ENST00000591175 560 ntBASIC27.87■■■□□ 2.05
KDM3AQ9Y4C1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
KDM3AQ9Y4C1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
KDM3AQ9Y4C1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
KDM3AQ9Y4C1 AL449106.1-201ENST00000608517 1980 ntBASIC27.86■■■□□ 2.05
KDM3AQ9Y4C1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
KDM3AQ9Y4C1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
KDM3AQ9Y4C1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
KDM3AQ9Y4C1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
KDM3AQ9Y4C1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
KDM3AQ9Y4C1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
KDM3AQ9Y4C1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
KDM3AQ9Y4C1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
KDM3AQ9Y4C1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.84■■■□□ 2.05
KDM3AQ9Y4C1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.84■■■□□ 2.05
KDM3AQ9Y4C1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
KDM3AQ9Y4C1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.83■■■□□ 2.05
KDM3AQ9Y4C1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.83■■■□□ 2.05
KDM3AQ9Y4C1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.83■■■□□ 2.05
KDM3AQ9Y4C1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
KDM3AQ9Y4C1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
KDM3AQ9Y4C1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
KDM3AQ9Y4C1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.83■■■□□ 2.04
KDM3AQ9Y4C1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
KDM3AQ9Y4C1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KDM3AQ9Y4C1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
KDM3AQ9Y4C1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
KDM3AQ9Y4C1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
KDM3AQ9Y4C1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
KDM3AQ9Y4C1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
KDM3AQ9Y4C1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
KDM3AQ9Y4C1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.8■■■□□ 2.04
KDM3AQ9Y4C1 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.8■■■□□ 2.04
KDM3AQ9Y4C1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
KDM3AQ9Y4C1 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.8■■■□□ 2.04
KDM3AQ9Y4C1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
KDM3AQ9Y4C1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
KDM3AQ9Y4C1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.8■■■□□ 2.04
KDM3AQ9Y4C1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.79■■■□□ 2.04
KDM3AQ9Y4C1 AC126177.7-201ENST00000547904 679 ntBASIC27.79■■■□□ 2.04
KDM3AQ9Y4C1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.78■■■□□ 2.04
KDM3AQ9Y4C1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
KDM3AQ9Y4C1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
KDM3AQ9Y4C1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
KDM3AQ9Y4C1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
KDM3AQ9Y4C1 ECEL1P2-201ENST00000461596 1295 ntBASIC27.77■■■□□ 2.04
KDM3AQ9Y4C1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.77■■■□□ 2.04
KDM3AQ9Y4C1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
KDM3AQ9Y4C1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
KDM3AQ9Y4C1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
KDM3AQ9Y4C1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
KDM3AQ9Y4C1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
KDM3AQ9Y4C1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.76■■■□□ 2.03
KDM3AQ9Y4C1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
KDM3AQ9Y4C1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
KDM3AQ9Y4C1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms