Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.68■□□□□ 0.9
UBQLN2Q9UHD9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
UBQLN2Q9UHD9 SETD8P1-201ENST00000623146 1180 ntBASIC20.68■□□□□ 0.9
UBQLN2Q9UHD9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN2Q9UHD9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN2Q9UHD9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN2Q9UHD9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
UBQLN2Q9UHD9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN2Q9UHD9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN2Q9UHD9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN2Q9UHD9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN2Q9UHD9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN2Q9UHD9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN2Q9UHD9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
UBQLN2Q9UHD9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN2Q9UHD9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.65■□□□□ 0.9
UBQLN2Q9UHD9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN2Q9UHD9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN2Q9UHD9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN2Q9UHD9 AC068473.5-201ENST00000616428 2072 ntBASIC20.65■□□□□ 0.9
UBQLN2Q9UHD9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBQLN2Q9UHD9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.9
UBQLN2Q9UHD9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.64■□□□□ 0.9
UBQLN2Q9UHD9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN2Q9UHD9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN2Q9UHD9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN2Q9UHD9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN2Q9UHD9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN2Q9UHD9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN2Q9UHD9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN2Q9UHD9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
UBQLN2Q9UHD9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
UBQLN2Q9UHD9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN2Q9UHD9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN2Q9UHD9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN2Q9UHD9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN2Q9UHD9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN2Q9UHD9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN2Q9UHD9 AC092803.2-201ENST00000564287 1899 ntBASIC20.61■□□□□ 0.89
UBQLN2Q9UHD9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN2Q9UHD9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN2Q9UHD9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
UBQLN2Q9UHD9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN2Q9UHD9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
UBQLN2Q9UHD9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN2Q9UHD9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
UBQLN2Q9UHD9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN2Q9UHD9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
UBQLN2Q9UHD9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.6■□□□□ 0.89
UBQLN2Q9UHD9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN2Q9UHD9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN2Q9UHD9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN2Q9UHD9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN2Q9UHD9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN2Q9UHD9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN2Q9UHD9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN2Q9UHD9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN2Q9UHD9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN2Q9UHD9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN2Q9UHD9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBQLN2Q9UHD9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBQLN2Q9UHD9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.58■□□□□ 0.89
UBQLN2Q9UHD9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBQLN2Q9UHD9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.58■□□□□ 0.89
UBQLN2Q9UHD9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.58■□□□□ 0.89
UBQLN2Q9UHD9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UBQLN2Q9UHD9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.57■□□□□ 0.88
UBQLN2Q9UHD9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.57■□□□□ 0.88
UBQLN2Q9UHD9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
UBQLN2Q9UHD9 AC097358.2-201ENST00000607541 1159 ntBASIC20.57■□□□□ 0.88
UBQLN2Q9UHD9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBQLN2Q9UHD9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBQLN2Q9UHD9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBQLN2Q9UHD9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBQLN2Q9UHD9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBQLN2Q9UHD9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBQLN2Q9UHD9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.55■□□□□ 0.88
UBQLN2Q9UHD9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBQLN2Q9UHD9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBQLN2Q9UHD9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.54■□□□□ 0.88
UBQLN2Q9UHD9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.54■□□□□ 0.88
UBQLN2Q9UHD9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBQLN2Q9UHD9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBQLN2Q9UHD9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBQLN2Q9UHD9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBQLN2Q9UHD9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBQLN2Q9UHD9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
UBQLN2Q9UHD9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
UBQLN2Q9UHD9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBQLN2Q9UHD9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBQLN2Q9UHD9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.52■□□□□ 0.88
UBQLN2Q9UHD9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
UBQLN2Q9UHD9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBQLN2Q9UHD9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBQLN2Q9UHD9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
UBQLN2Q9UHD9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBQLN2Q9UHD9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBQLN2Q9UHD9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBQLN2Q9UHD9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.51■□□□□ 0.87
UBQLN2Q9UHD9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms