Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMCO4Q9NRQ5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.52■□□□□ 0.72
SMCO4Q9NRQ5 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMCO4Q9NRQ5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMCO4Q9NRQ5 AC092803.2-201ENST00000564287 1899 ntBASIC19.52■□□□□ 0.72
SMCO4Q9NRQ5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SMCO4Q9NRQ5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SMCO4Q9NRQ5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.51■□□□□ 0.71
SMCO4Q9NRQ5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
SMCO4Q9NRQ5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMCO4Q9NRQ5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMCO4Q9NRQ5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMCO4Q9NRQ5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMCO4Q9NRQ5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMCO4Q9NRQ5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.49■□□□□ 0.71
SMCO4Q9NRQ5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.49■□□□□ 0.71
SMCO4Q9NRQ5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMCO4Q9NRQ5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SMCO4Q9NRQ5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.48■□□□□ 0.71
SMCO4Q9NRQ5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMCO4Q9NRQ5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.47■□□□□ 0.71
SMCO4Q9NRQ5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
SMCO4Q9NRQ5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMCO4Q9NRQ5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMCO4Q9NRQ5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMCO4Q9NRQ5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMCO4Q9NRQ5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.47■□□□□ 0.71
SMCO4Q9NRQ5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMCO4Q9NRQ5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMCO4Q9NRQ5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMCO4Q9NRQ5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMCO4Q9NRQ5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMCO4Q9NRQ5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMCO4Q9NRQ5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMCO4Q9NRQ5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMCO4Q9NRQ5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.44■□□□□ 0.7
SMCO4Q9NRQ5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMCO4Q9NRQ5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMCO4Q9NRQ5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMCO4Q9NRQ5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMCO4Q9NRQ5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SMCO4Q9NRQ5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.44■□□□□ 0.7
SMCO4Q9NRQ5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMCO4Q9NRQ5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SMCO4Q9NRQ5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMCO4Q9NRQ5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SMCO4Q9NRQ5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMCO4Q9NRQ5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SMCO4Q9NRQ5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.42■□□□□ 0.7
SMCO4Q9NRQ5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMCO4Q9NRQ5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMCO4Q9NRQ5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.42■□□□□ 0.7
SMCO4Q9NRQ5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMCO4Q9NRQ5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMCO4Q9NRQ5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMCO4Q9NRQ5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMCO4Q9NRQ5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMCO4Q9NRQ5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SMCO4Q9NRQ5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SMCO4Q9NRQ5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMCO4Q9NRQ5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SMCO4Q9NRQ5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SMCO4Q9NRQ5 AC142381.3-201ENST00000568208 1670 ntBASIC19.4■□□□□ 0.7
SMCO4Q9NRQ5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMCO4Q9NRQ5 AL139125.2-201ENST00000623134 1869 ntBASIC19.4■□□□□ 0.7
SMCO4Q9NRQ5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMCO4Q9NRQ5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMCO4Q9NRQ5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMCO4Q9NRQ5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMCO4Q9NRQ5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMCO4Q9NRQ5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMCO4Q9NRQ5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMCO4Q9NRQ5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMCO4Q9NRQ5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SMCO4Q9NRQ5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMCO4Q9NRQ5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMCO4Q9NRQ5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMCO4Q9NRQ5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
SMCO4Q9NRQ5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMCO4Q9NRQ5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMCO4Q9NRQ5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMCO4Q9NRQ5 AP004833.2-201ENST00000532228 1454 ntBASIC19.38■□□□□ 0.69
SMCO4Q9NRQ5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SMCO4Q9NRQ5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMCO4Q9NRQ5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMCO4Q9NRQ5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMCO4Q9NRQ5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.37■□□□□ 0.69
SMCO4Q9NRQ5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.37■□□□□ 0.69
SMCO4Q9NRQ5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SMCO4Q9NRQ5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.37■□□□□ 0.69
SMCO4Q9NRQ5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
SMCO4Q9NRQ5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.36■□□□□ 0.69
SMCO4Q9NRQ5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMCO4Q9NRQ5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMCO4Q9NRQ5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.36■□□□□ 0.69
SMCO4Q9NRQ5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMCO4Q9NRQ5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMCO4Q9NRQ5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.35■□□□□ 0.69
SMCO4Q9NRQ5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMCO4Q9NRQ5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms