Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCDHB16Q9NRJ7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHB16Q9NRJ7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHB16Q9NRJ7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHB16Q9NRJ7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB16Q9NRJ7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB16Q9NRJ7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHB16Q9NRJ7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB16Q9NRJ7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB16Q9NRJ7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB16Q9NRJ7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB16Q9NRJ7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PCDHB16Q9NRJ7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB16Q9NRJ7 AC110285.7-201ENST00000624417 1536 ntBASIC21.19■□□□□ 0.98
PCDHB16Q9NRJ7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB16Q9NRJ7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB16Q9NRJ7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHB16Q9NRJ7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB16Q9NRJ7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB16Q9NRJ7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB16Q9NRJ7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDHB16Q9NRJ7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB16Q9NRJ7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB16Q9NRJ7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB16Q9NRJ7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHB16Q9NRJ7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
PCDHB16Q9NRJ7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PCDHB16Q9NRJ7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHB16Q9NRJ7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB16Q9NRJ7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB16Q9NRJ7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
PCDHB16Q9NRJ7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB16Q9NRJ7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB16Q9NRJ7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB16Q9NRJ7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB16Q9NRJ7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB16Q9NRJ7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB16Q9NRJ7 RPS2P35-201ENST00000443417 897 ntBASIC21.15■□□□□ 0.98
PCDHB16Q9NRJ7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB16Q9NRJ7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHB16Q9NRJ7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB16Q9NRJ7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHB16Q9NRJ7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
PCDHB16Q9NRJ7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHB16Q9NRJ7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDHB16Q9NRJ7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB16Q9NRJ7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PCDHB16Q9NRJ7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB16Q9NRJ7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHB16Q9NRJ7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHB16Q9NRJ7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB16Q9NRJ7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB16Q9NRJ7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB16Q9NRJ7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.13■□□□□ 0.97
PCDHB16Q9NRJ7 DUX4L29-201ENST00000425409 679 ntBASIC21.13■□□□□ 0.97
PCDHB16Q9NRJ7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.13■□□□□ 0.97
PCDHB16Q9NRJ7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHB16Q9NRJ7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDHB16Q9NRJ7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB16Q9NRJ7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHB16Q9NRJ7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHB16Q9NRJ7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PCDHB16Q9NRJ7 AC091060.1-201ENST00000623524 1766 ntBASIC21.12■□□□□ 0.97
PCDHB16Q9NRJ7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDHB16Q9NRJ7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PCDHB16Q9NRJ7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB16Q9NRJ7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB16Q9NRJ7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB16Q9NRJ7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB16Q9NRJ7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB16Q9NRJ7 AC145676.1-201ENST00000514988 2004 ntBASIC21.11■□□□□ 0.97
PCDHB16Q9NRJ7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB16Q9NRJ7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB16Q9NRJ7 AP004609.3-201ENST00000610705 1884 ntBASIC21.1■□□□□ 0.97
PCDHB16Q9NRJ7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB16Q9NRJ7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB16Q9NRJ7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHB16Q9NRJ7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB16Q9NRJ7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB16Q9NRJ7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB16Q9NRJ7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB16Q9NRJ7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHB16Q9NRJ7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHB16Q9NRJ7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB16Q9NRJ7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB16Q9NRJ7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB16Q9NRJ7 AL449106.1-201ENST00000608517 1980 ntBASIC21.08■□□□□ 0.96
PCDHB16Q9NRJ7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.08■□□□□ 0.96
PCDHB16Q9NRJ7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDHB16Q9NRJ7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB16Q9NRJ7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCDHB16Q9NRJ7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB16Q9NRJ7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB16Q9NRJ7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHB16Q9NRJ7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB16Q9NRJ7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB16Q9NRJ7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB16Q9NRJ7 AC021231.2-201ENST00000594613 730 ntBASIC21.06■□□□□ 0.96
PCDHB16Q9NRJ7 WHAMMP3-201ENST00000611636 1609 ntBASIC21.06■□□□□ 0.96
PCDHB16Q9NRJ7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms