Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
BRF2Q9HAW0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.72■■□□□ 1.39
BRF2Q9HAW0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BRF2Q9HAW0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.71■■□□□ 1.39
BRF2Q9HAW0 MIR219A2-201ENST00000608502 1504 ntBASIC23.71■■□□□ 1.39
BRF2Q9HAW0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BRF2Q9HAW0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
BRF2Q9HAW0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.71■■□□□ 1.39
BRF2Q9HAW0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.71■■□□□ 1.39
BRF2Q9HAW0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
BRF2Q9HAW0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
BRF2Q9HAW0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
BRF2Q9HAW0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.7■■□□□ 1.38
BRF2Q9HAW0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
BRF2Q9HAW0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
BRF2Q9HAW0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
BRF2Q9HAW0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
BRF2Q9HAW0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
BRF2Q9HAW0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
BRF2Q9HAW0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.68■■□□□ 1.38
BRF2Q9HAW0 CR559946.2-201ENST00000623684 991 ntBASIC23.68■■□□□ 1.38
BRF2Q9HAW0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
BRF2Q9HAW0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
BRF2Q9HAW0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
BRF2Q9HAW0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
BRF2Q9HAW0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.67■■□□□ 1.38
BRF2Q9HAW0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.67■■□□□ 1.38
BRF2Q9HAW0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
BRF2Q9HAW0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BRF2Q9HAW0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
BRF2Q9HAW0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
BRF2Q9HAW0 HLA-V-202ENST00000446817 847 ntBASIC23.65■■□□□ 1.38
BRF2Q9HAW0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
BRF2Q9HAW0 AC091060.1-201ENST00000623524 1766 ntBASIC23.65■■□□□ 1.38
BRF2Q9HAW0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.65■■□□□ 1.38
BRF2Q9HAW0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.64■■□□□ 1.38
BRF2Q9HAW0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.64■■□□□ 1.38
BRF2Q9HAW0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
BRF2Q9HAW0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.64■■□□□ 1.37
BRF2Q9HAW0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.64■■□□□ 1.37
BRF2Q9HAW0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
BRF2Q9HAW0 MIR3648-2-201ENST00000581792 180 ntBASIC23.63■■□□□ 1.37
BRF2Q9HAW0 MIR3648-1-201ENST00000615959 180 ntBASIC23.63■■□□□ 1.37
BRF2Q9HAW0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
BRF2Q9HAW0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.62■■□□□ 1.37
BRF2Q9HAW0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
BRF2Q9HAW0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.62■■□□□ 1.37
BRF2Q9HAW0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
BRF2Q9HAW0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.61■■□□□ 1.37
BRF2Q9HAW0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BRF2Q9HAW0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BRF2Q9HAW0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BRF2Q9HAW0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BRF2Q9HAW0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.6■■□□□ 1.37
BRF2Q9HAW0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BRF2Q9HAW0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BRF2Q9HAW0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.59■■□□□ 1.37
BRF2Q9HAW0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.59■■□□□ 1.37
BRF2Q9HAW0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BRF2Q9HAW0 AC145676.1-201ENST00000514988 2004 ntBASIC23.59■■□□□ 1.37
BRF2Q9HAW0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
BRF2Q9HAW0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
BRF2Q9HAW0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.58■■□□□ 1.37
BRF2Q9HAW0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
BRF2Q9HAW0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.58■■□□□ 1.37
BRF2Q9HAW0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.58■■□□□ 1.37
BRF2Q9HAW0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
BRF2Q9HAW0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BRF2Q9HAW0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
BRF2Q9HAW0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
BRF2Q9HAW0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
BRF2Q9HAW0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
BRF2Q9HAW0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
BRF2Q9HAW0 AC092803.2-201ENST00000564287 1899 ntBASIC23.55■■□□□ 1.36
BRF2Q9HAW0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BRF2Q9HAW0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
BRF2Q9HAW0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
BRF2Q9HAW0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
BRF2Q9HAW0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
BRF2Q9HAW0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.54■■□□□ 1.36
BRF2Q9HAW0 AC016575.1-201ENST00000607026 382 ntBASIC23.54■■□□□ 1.36
BRF2Q9HAW0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms