Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.15■■□□□ 1.62
CDC42EP4Q9H3Q1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.15■■□□□ 1.62
CDC42EP4Q9H3Q1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.15■■□□□ 1.62
CDC42EP4Q9H3Q1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42EP4Q9H3Q1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.15■■□□□ 1.62
CDC42EP4Q9H3Q1 DUX4L28-201ENST00000623687 678 ntBASIC25.15■■□□□ 1.62
CDC42EP4Q9H3Q1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDC42EP4Q9H3Q1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42EP4Q9H3Q1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.14■■□□□ 1.62
CDC42EP4Q9H3Q1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42EP4Q9H3Q1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDC42EP4Q9H3Q1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.13■■□□□ 1.61
CDC42EP4Q9H3Q1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42EP4Q9H3Q1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42EP4Q9H3Q1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDC42EP4Q9H3Q1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CDC42EP4Q9H3Q1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CDC42EP4Q9H3Q1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.12■■□□□ 1.61
CDC42EP4Q9H3Q1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CDC42EP4Q9H3Q1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CDC42EP4Q9H3Q1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42EP4Q9H3Q1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
CDC42EP4Q9H3Q1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42EP4Q9H3Q1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.11■■□□□ 1.61
CDC42EP4Q9H3Q1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42EP4Q9H3Q1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDC42EP4Q9H3Q1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.11■■□□□ 1.61
CDC42EP4Q9H3Q1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.1■■□□□ 1.61
CDC42EP4Q9H3Q1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.1■■□□□ 1.61
CDC42EP4Q9H3Q1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.1■■□□□ 1.61
CDC42EP4Q9H3Q1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CDC42EP4Q9H3Q1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDC42EP4Q9H3Q1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDC42EP4Q9H3Q1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.09■■□□□ 1.61
CDC42EP4Q9H3Q1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42EP4Q9H3Q1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42EP4Q9H3Q1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42EP4Q9H3Q1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42EP4Q9H3Q1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42EP4Q9H3Q1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.08■■□□□ 1.61
CDC42EP4Q9H3Q1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42EP4Q9H3Q1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42EP4Q9H3Q1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42EP4Q9H3Q1 WHAMMP3-201ENST00000611636 1609 ntBASIC25.08■■□□□ 1.6
CDC42EP4Q9H3Q1 AC110285.7-201ENST00000624417 1536 ntBASIC25.07■■□□□ 1.6
CDC42EP4Q9H3Q1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
CDC42EP4Q9H3Q1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42EP4Q9H3Q1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42EP4Q9H3Q1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
CDC42EP4Q9H3Q1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CDC42EP4Q9H3Q1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42EP4Q9H3Q1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42EP4Q9H3Q1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42EP4Q9H3Q1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CDC42EP4Q9H3Q1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42EP4Q9H3Q1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42EP4Q9H3Q1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42EP4Q9H3Q1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42EP4Q9H3Q1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.05■■□□□ 1.6
CDC42EP4Q9H3Q1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.05■■□□□ 1.6
CDC42EP4Q9H3Q1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CDC42EP4Q9H3Q1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42EP4Q9H3Q1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.05■■□□□ 1.6
CDC42EP4Q9H3Q1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42EP4Q9H3Q1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDC42EP4Q9H3Q1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.04■■□□□ 1.6
CDC42EP4Q9H3Q1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.04■■□□□ 1.6
CDC42EP4Q9H3Q1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.04■■□□□ 1.6
CDC42EP4Q9H3Q1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.04■■□□□ 1.6
CDC42EP4Q9H3Q1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.03■■□□□ 1.6
CDC42EP4Q9H3Q1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.03■■□□□ 1.6
CDC42EP4Q9H3Q1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDC42EP4Q9H3Q1 ERN1-208ENST00000606895 2068 ntBASIC25.03■■□□□ 1.6
CDC42EP4Q9H3Q1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.02■■□□□ 1.6
CDC42EP4Q9H3Q1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CDC42EP4Q9H3Q1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42EP4Q9H3Q1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42EP4Q9H3Q1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.01■■□□□ 1.59
CDC42EP4Q9H3Q1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42EP4Q9H3Q1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDC42EP4Q9H3Q1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.01■■□□□ 1.59
CDC42EP4Q9H3Q1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
CDC42EP4Q9H3Q1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDC42EP4Q9H3Q1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDC42EP4Q9H3Q1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42EP4Q9H3Q1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42EP4Q9H3Q1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CDC42EP4Q9H3Q1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42EP4Q9H3Q1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42EP4Q9H3Q1 AC010501.1-201ENST00000606270 1962 ntBASIC24.98■■□□□ 1.59
CDC42EP4Q9H3Q1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDC42EP4Q9H3Q1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42EP4Q9H3Q1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
CDC42EP4Q9H3Q1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.97■■□□□ 1.59
CDC42EP4Q9H3Q1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.97■■□□□ 1.59
CDC42EP4Q9H3Q1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.97■■□□□ 1.59
CDC42EP4Q9H3Q1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDC42EP4Q9H3Q1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.97■■□□□ 1.59
CDC42EP4Q9H3Q1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
CDC42EP4Q9H3Q1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms