Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCRT1Q9BWW7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCRT1Q9BWW7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCRT1Q9BWW7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCRT1Q9BWW7 AC097358.2-201ENST00000607541 1159 ntBASIC19.77■□□□□ 0.76
SCRT1Q9BWW7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.77■□□□□ 0.76
SCRT1Q9BWW7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SCRT1Q9BWW7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SCRT1Q9BWW7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.76■□□□□ 0.75
SCRT1Q9BWW7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SCRT1Q9BWW7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCRT1Q9BWW7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCRT1Q9BWW7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.75■□□□□ 0.75
SCRT1Q9BWW7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCRT1Q9BWW7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.74■□□□□ 0.75
SCRT1Q9BWW7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SCRT1Q9BWW7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCRT1Q9BWW7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCRT1Q9BWW7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCRT1Q9BWW7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SCRT1Q9BWW7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCRT1Q9BWW7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.73■□□□□ 0.75
SCRT1Q9BWW7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.73■□□□□ 0.75
SCRT1Q9BWW7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
SCRT1Q9BWW7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.73■□□□□ 0.75
SCRT1Q9BWW7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCRT1Q9BWW7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCRT1Q9BWW7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.72■□□□□ 0.75
SCRT1Q9BWW7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.72■□□□□ 0.75
SCRT1Q9BWW7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.72■□□□□ 0.75
SCRT1Q9BWW7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCRT1Q9BWW7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCRT1Q9BWW7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCRT1Q9BWW7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCRT1Q9BWW7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCRT1Q9BWW7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCRT1Q9BWW7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCRT1Q9BWW7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCRT1Q9BWW7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCRT1Q9BWW7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCRT1Q9BWW7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.71■□□□□ 0.75
SCRT1Q9BWW7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCRT1Q9BWW7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCRT1Q9BWW7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCRT1Q9BWW7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCRT1Q9BWW7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCRT1Q9BWW7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SCRT1Q9BWW7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCRT1Q9BWW7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCRT1Q9BWW7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.7■□□□□ 0.74
SCRT1Q9BWW7 AC100797.4-201ENST00000631653 1827 ntBASIC19.69■□□□□ 0.74
SCRT1Q9BWW7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCRT1Q9BWW7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCRT1Q9BWW7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCRT1Q9BWW7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCRT1Q9BWW7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SCRT1Q9BWW7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCRT1Q9BWW7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCRT1Q9BWW7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCRT1Q9BWW7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCRT1Q9BWW7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCRT1Q9BWW7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCRT1Q9BWW7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCRT1Q9BWW7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.67■□□□□ 0.74
SCRT1Q9BWW7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SCRT1Q9BWW7 LINC00543-201ENST00000567234 1845 ntBASIC19.67■□□□□ 0.74
SCRT1Q9BWW7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.67■□□□□ 0.74
SCRT1Q9BWW7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCRT1Q9BWW7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.66■□□□□ 0.74
SCRT1Q9BWW7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCRT1Q9BWW7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.66■□□□□ 0.74
SCRT1Q9BWW7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCRT1Q9BWW7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCRT1Q9BWW7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCRT1Q9BWW7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCRT1Q9BWW7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SCRT1Q9BWW7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SCRT1Q9BWW7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCRT1Q9BWW7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCRT1Q9BWW7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCRT1Q9BWW7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.65■□□□□ 0.74
SCRT1Q9BWW7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
SCRT1Q9BWW7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCRT1Q9BWW7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SCRT1Q9BWW7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCRT1Q9BWW7 MIR762-201ENST00000390236 83 ntBASIC19.64■□□□□ 0.73
SCRT1Q9BWW7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SCRT1Q9BWW7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SCRT1Q9BWW7 AP002414.2-202ENST00000590929 1450 ntBASIC19.64■□□□□ 0.73
SCRT1Q9BWW7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCRT1Q9BWW7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCRT1Q9BWW7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCRT1Q9BWW7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCRT1Q9BWW7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCRT1Q9BWW7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.63■□□□□ 0.73
SCRT1Q9BWW7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.63■□□□□ 0.73
SCRT1Q9BWW7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SCRT1Q9BWW7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCRT1Q9BWW7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SCRT1Q9BWW7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms