Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIMD2Q9BT23 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIMD2Q9BT23 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC14.52□□□□□ -0.09
LIMD2Q9BT23 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LIMD2Q9BT23 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMD2Q9BT23 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LIMD2Q9BT23 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMD2Q9BT23 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMD2Q9BT23 MLEC-202ENST00000412616 841 ntTSL 3 BASIC14.51□□□□□ -0.09
LIMD2Q9BT23 RPS2P35-201ENST00000443417 897 ntBASIC14.51□□□□□ -0.09
LIMD2Q9BT23 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMD2Q9BT23 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIMD2Q9BT23 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMD2Q9BT23 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LIMD2Q9BT23 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIMD2Q9BT23 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC14.5□□□□□ -0.09
LIMD2Q9BT23 AC110285.7-201ENST00000624417 1536 ntBASIC14.5□□□□□ -0.09
LIMD2Q9BT23 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LIMD2Q9BT23 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIMD2Q9BT23 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 LINC01971-201ENST00000617888 1048 ntBASIC14.49□□□□□ -0.09
LIMD2Q9BT23 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LIMD2Q9BT23 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC14.48□□□□□ -0.09
LIMD2Q9BT23 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMD2Q9BT23 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC14.48□□□□□ -0.09
LIMD2Q9BT23 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMD2Q9BT23 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMD2Q9BT23 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LIMD2Q9BT23 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMD2Q9BT23 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
LIMD2Q9BT23 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMD2Q9BT23 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LIMD2Q9BT23 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMD2Q9BT23 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMD2Q9BT23 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LIMD2Q9BT23 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LIMD2Q9BT23 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMD2Q9BT23 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMD2Q9BT23 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LIMD2Q9BT23 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LIMD2Q9BT23 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMD2Q9BT23 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMD2Q9BT23 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LIMD2Q9BT23 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMD2Q9BT23 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LIMD2Q9BT23 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LIMD2Q9BT23 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LIMD2Q9BT23 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LIMD2Q9BT23 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMD2Q9BT23 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMD2Q9BT23 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC14.45□□□□□ -0.1
LIMD2Q9BT23 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LIMD2Q9BT23 HGH1-207ENST00000628266 258 ntTSL 5 BASIC14.45□□□□□ -0.1
LIMD2Q9BT23 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LIMD2Q9BT23 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMD2Q9BT23 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMD2Q9BT23 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.45□□□□□ -0.1
LIMD2Q9BT23 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMD2Q9BT23 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMD2Q9BT23 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIMD2Q9BT23 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LIMD2Q9BT23 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LIMD2Q9BT23 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMD2Q9BT23 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC14.42□□□□□ -0.1
LIMD2Q9BT23 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
LIMD2Q9BT23 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LIMD2Q9BT23 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LIMD2Q9BT23 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LIMD2Q9BT23 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIMD2Q9BT23 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LIMD2Q9BT23 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIMD2Q9BT23 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LIMD2Q9BT23 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LIMD2Q9BT23 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC14.41□□□□□ -0.1
LIMD2Q9BT23 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms