Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CPNE1Q99829 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.66■■□□□ 1.54
CPNE1Q99829 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.66■■□□□ 1.54
CPNE1Q99829 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CPNE1Q99829 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CPNE1Q99829 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CPNE1Q99829 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CPNE1Q99829 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CPNE1Q99829 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.65■■□□□ 1.54
CPNE1Q99829 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.65■■□□□ 1.54
CPNE1Q99829 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.65■■□□□ 1.54
CPNE1Q99829 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CPNE1Q99829 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.64■■□□□ 1.54
CPNE1Q99829 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CPNE1Q99829 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CPNE1Q99829 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CPNE1Q99829 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CPNE1Q99829 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CPNE1Q99829 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CPNE1Q99829 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.63■■□□□ 1.53
CPNE1Q99829 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.63■■□□□ 1.53
CPNE1Q99829 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CPNE1Q99829 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CPNE1Q99829 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.62■■□□□ 1.53
CPNE1Q99829 LINC01971-201ENST00000617888 1048 ntBASIC24.62■■□□□ 1.53
CPNE1Q99829 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CPNE1Q99829 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CPNE1Q99829 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CPNE1Q99829 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CPNE1Q99829 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CPNE1Q99829 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
CPNE1Q99829 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CPNE1Q99829 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CPNE1Q99829 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.61■■□□□ 1.53
CPNE1Q99829 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
CPNE1Q99829 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CPNE1Q99829 AC020928.2-201ENST00000588717 2197 ntBASIC24.6■■□□□ 1.53
CPNE1Q99829 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
CPNE1Q99829 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPNE1Q99829 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CPNE1Q99829 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.6■■□□□ 1.53
CPNE1Q99829 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CPNE1Q99829 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPNE1Q99829 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPNE1Q99829 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CPNE1Q99829 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.59■■□□□ 1.53
CPNE1Q99829 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
CPNE1Q99829 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.59■■□□□ 1.53
CPNE1Q99829 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CPNE1Q99829 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CPNE1Q99829 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
CPNE1Q99829 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CPNE1Q99829 AC135731.1-201ENST00000569415 2548 ntBASIC24.58■■□□□ 1.53
CPNE1Q99829 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CPNE1Q99829 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CPNE1Q99829 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CPNE1Q99829 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CPNE1Q99829 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CPNE1Q99829 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPNE1Q99829 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.57■■□□□ 1.52
CPNE1Q99829 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CPNE1Q99829 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPNE1Q99829 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.57■■□□□ 1.52
CPNE1Q99829 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CPNE1Q99829 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CPNE1Q99829 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.56■■□□□ 1.52
CPNE1Q99829 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.56■■□□□ 1.52
CPNE1Q99829 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CPNE1Q99829 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.56■■□□□ 1.52
CPNE1Q99829 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CPNE1Q99829 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CPNE1Q99829 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CPNE1Q99829 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.55■■□□□ 1.52
CPNE1Q99829 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CPNE1Q99829 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CPNE1Q99829 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CPNE1Q99829 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CPNE1Q99829 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPNE1Q99829 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
CPNE1Q99829 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.54■■□□□ 1.52
CPNE1Q99829 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CPNE1Q99829 RPS2P35-201ENST00000443417 897 ntBASIC24.54■■□□□ 1.52
CPNE1Q99829 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CPNE1Q99829 DUX4L13-201ENST00000554103 1267 ntBASIC24.54■■□□□ 1.52
CPNE1Q99829 DUX4L15-201ENST00000611059 1267 ntBASIC24.54■■□□□ 1.52
CPNE1Q99829 DUX4L23-201ENST00000615195 1269 ntBASIC24.54■■□□□ 1.52
CPNE1Q99829 DUX4L24-201ENST00000617576 1269 ntBASIC24.54■■□□□ 1.52
CPNE1Q99829 DUX4L22-201ENST00000618238 1269 ntBASIC24.54■■□□□ 1.52
CPNE1Q99829 DUX4L20-201ENST00000619712 1269 ntBASIC24.54■■□□□ 1.52
CPNE1Q99829 DUX4L21-201ENST00000622058 1269 ntBASIC24.54■■□□□ 1.52
CPNE1Q99829 DUX4L10-201ENST00000622460 1267 ntBASIC24.54■■□□□ 1.52
CPNE1Q99829 DUX4L25-201ENST00000624915 1269 ntBASIC24.54■■□□□ 1.52
CPNE1Q99829 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CPNE1Q99829 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPNE1Q99829 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CPNE1Q99829 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPNE1Q99829 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPNE1Q99829 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.52■■□□□ 1.52
CPNE1Q99829 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CPNE1Q99829 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms