Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AL359258.2-201ENST00000564063 1566 ntBASIC20.76■□□□□ 0.91
CCL13Q99616 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCL13Q99616 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.75■□□□□ 0.91
CCL13Q99616 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCL13Q99616 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL13Q99616 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.74■□□□□ 0.91
CCL13Q99616 AC126177.7-201ENST00000547904 679 ntBASIC20.74■□□□□ 0.91
CCL13Q99616 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CCL13Q99616 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.73■□□□□ 0.91
CCL13Q99616 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.73■□□□□ 0.91
CCL13Q99616 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCL13Q99616 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCL13Q99616 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCL13Q99616 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCL13Q99616 AC022413.1-201ENST00000624602 984 ntBASIC20.72■□□□□ 0.91
CCL13Q99616 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCL13Q99616 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCL13Q99616 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCL13Q99616 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCL13Q99616 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.71■□□□□ 0.91
CCL13Q99616 AL449106.1-201ENST00000608517 1980 ntBASIC20.71■□□□□ 0.91
CCL13Q99616 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCL13Q99616 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCL13Q99616 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCL13Q99616 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCL13Q99616 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCL13Q99616 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCL13Q99616 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.7■□□□□ 0.9
CCL13Q99616 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.69■□□□□ 0.9
CCL13Q99616 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCL13Q99616 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCL13Q99616 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCL13Q99616 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.68■□□□□ 0.9
CCL13Q99616 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.68■□□□□ 0.9
CCL13Q99616 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCL13Q99616 AC060814.1-201ENST00000554326 538 ntBASIC20.68■□□□□ 0.9
CCL13Q99616 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCL13Q99616 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCL13Q99616 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCL13Q99616 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCL13Q99616 GPX1-201ENST00000419349 1106 ntBASIC20.67■□□□□ 0.9
CCL13Q99616 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.67■□□□□ 0.9
CCL13Q99616 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCL13Q99616 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCL13Q99616 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCL13Q99616 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCL13Q99616 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.66■□□□□ 0.9
CCL13Q99616 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL13Q99616 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCL13Q99616 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCL13Q99616 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCL13Q99616 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCL13Q99616 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL13Q99616 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL13Q99616 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL13Q99616 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.65■□□□□ 0.9
CCL13Q99616 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL13Q99616 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL13Q99616 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL13Q99616 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCL13Q99616 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCL13Q99616 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCL13Q99616 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCL13Q99616 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.63■□□□□ 0.89
CCL13Q99616 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.63■□□□□ 0.89
CCL13Q99616 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.63■□□□□ 0.89
CCL13Q99616 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.63■□□□□ 0.89
CCL13Q99616 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL13Q99616 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL13Q99616 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL13Q99616 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCL13Q99616 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL13Q99616 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCL13Q99616 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCL13Q99616 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CCL13Q99616 AL121749.1-202ENST00000609313 2153 ntBASIC20.61■□□□□ 0.89
CCL13Q99616 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.61■□□□□ 0.89
CCL13Q99616 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.61■□□□□ 0.89
CCL13Q99616 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL13Q99616 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL13Q99616 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL13Q99616 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL13Q99616 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL13Q99616 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL13Q99616 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.6■□□□□ 0.89
CCL13Q99616 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.59■□□□□ 0.89
CCL13Q99616 AP004609.3-201ENST00000610705 1884 ntBASIC20.59■□□□□ 0.89
CCL13Q99616 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCL13Q99616 HSD17B1P1-201ENST00000590052 955 ntBASIC20.59■□□□□ 0.89
CCL13Q99616 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.59■□□□□ 0.89
CCL13Q99616 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL13Q99616 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCL13Q99616 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL13Q99616 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCL13Q99616 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.58■□□□□ 0.88
CCL13Q99616 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCL13Q99616 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCL13Q99616 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.57■□□□□ 0.88
CCL13Q99616 AL157400.5-201ENST00000507624 621 ntBASIC20.57■□□□□ 0.88
CCL13Q99616 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms