Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDK5RAP1Q96SZ6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CDK5RAP1Q96SZ6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDK5RAP1Q96SZ6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
CDK5RAP1Q96SZ6 AC025884.2-201ENST00000553429 711 ntBASIC25.8■■□□□ 1.72
CDK5RAP1Q96SZ6 AC007029.1-201ENST00000604183 313 ntBASIC25.8■■□□□ 1.72
CDK5RAP1Q96SZ6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDK5RAP1Q96SZ6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.8■■□□□ 1.72
CDK5RAP1Q96SZ6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CDK5RAP1Q96SZ6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDK5RAP1Q96SZ6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDK5RAP1Q96SZ6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.79■■□□□ 1.72
CDK5RAP1Q96SZ6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDK5RAP1Q96SZ6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.79■■□□□ 1.72
CDK5RAP1Q96SZ6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.78■■□□□ 1.72
CDK5RAP1Q96SZ6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CDK5RAP1Q96SZ6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CDK5RAP1Q96SZ6 NTF6A-201ENST00000591175 560 ntBASIC25.78■■□□□ 1.72
CDK5RAP1Q96SZ6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CDK5RAP1Q96SZ6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.78■■□□□ 1.72
CDK5RAP1Q96SZ6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDK5RAP1Q96SZ6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDK5RAP1Q96SZ6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDK5RAP1Q96SZ6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.77■■□□□ 1.72
CDK5RAP1Q96SZ6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.77■■□□□ 1.72
CDK5RAP1Q96SZ6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.77■■□□□ 1.72
CDK5RAP1Q96SZ6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDK5RAP1Q96SZ6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
CDK5RAP1Q96SZ6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
CDK5RAP1Q96SZ6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDK5RAP1Q96SZ6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CDK5RAP1Q96SZ6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.76■■□□□ 1.71
CDK5RAP1Q96SZ6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CDK5RAP1Q96SZ6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDK5RAP1Q96SZ6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDK5RAP1Q96SZ6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
CDK5RAP1Q96SZ6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.75■■□□□ 1.71
CDK5RAP1Q96SZ6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.75■■□□□ 1.71
CDK5RAP1Q96SZ6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CDK5RAP1Q96SZ6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDK5RAP1Q96SZ6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDK5RAP1Q96SZ6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDK5RAP1Q96SZ6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CDK5RAP1Q96SZ6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.74■■□□□ 1.71
CDK5RAP1Q96SZ6 MIR3960-201ENST00000583311 91 ntBASIC25.74■■□□□ 1.71
CDK5RAP1Q96SZ6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CDK5RAP1Q96SZ6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDK5RAP1Q96SZ6 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.73■■□□□ 1.71
CDK5RAP1Q96SZ6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.73■■□□□ 1.71
CDK5RAP1Q96SZ6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CDK5RAP1Q96SZ6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.72■■□□□ 1.71
CDK5RAP1Q96SZ6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.72■■□□□ 1.71
CDK5RAP1Q96SZ6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CDK5RAP1Q96SZ6 AL359504.2-201ENST00000605506 1601 ntBASIC25.7■■□□□ 1.71
CDK5RAP1Q96SZ6 RP9P-202ENST00000450133 1212 ntBASIC25.7■■□□□ 1.7
CDK5RAP1Q96SZ6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDK5RAP1Q96SZ6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDK5RAP1Q96SZ6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDK5RAP1Q96SZ6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.69■■□□□ 1.7
CDK5RAP1Q96SZ6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.69■■□□□ 1.7
CDK5RAP1Q96SZ6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.69■■□□□ 1.7
CDK5RAP1Q96SZ6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
CDK5RAP1Q96SZ6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.69■■□□□ 1.7
CDK5RAP1Q96SZ6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
CDK5RAP1Q96SZ6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDK5RAP1Q96SZ6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDK5RAP1Q96SZ6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.68■■□□□ 1.7
CDK5RAP1Q96SZ6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDK5RAP1Q96SZ6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDK5RAP1Q96SZ6 U85056.1-201ENST00000616429 682 ntBASIC25.68■■□□□ 1.7
CDK5RAP1Q96SZ6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CDK5RAP1Q96SZ6 AL449106.1-201ENST00000608517 1980 ntBASIC25.67■■□□□ 1.7
CDK5RAP1Q96SZ6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.67■■□□□ 1.7
CDK5RAP1Q96SZ6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.67■■□□□ 1.7
CDK5RAP1Q96SZ6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDK5RAP1Q96SZ6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CDK5RAP1Q96SZ6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDK5RAP1Q96SZ6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.66■■□□□ 1.7
CDK5RAP1Q96SZ6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDK5RAP1Q96SZ6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CDK5RAP1Q96SZ6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDK5RAP1Q96SZ6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.65■■□□□ 1.7
CDK5RAP1Q96SZ6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDK5RAP1Q96SZ6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDK5RAP1Q96SZ6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CDK5RAP1Q96SZ6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CDK5RAP1Q96SZ6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDK5RAP1Q96SZ6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.65■■□□□ 1.7
CDK5RAP1Q96SZ6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDK5RAP1Q96SZ6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDK5RAP1Q96SZ6 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.64■■□□□ 1.7
CDK5RAP1Q96SZ6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.64■■□□□ 1.69
CDK5RAP1Q96SZ6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDK5RAP1Q96SZ6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.63■■□□□ 1.69
CDK5RAP1Q96SZ6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CDK5RAP1Q96SZ6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CDK5RAP1Q96SZ6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDK5RAP1Q96SZ6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDK5RAP1Q96SZ6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CDK5RAP1Q96SZ6 AC093536.1-201ENST00000569153 554 ntBASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms