Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
ATP6V0A1Q93050 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
ATP6V0A1Q93050 TSPY13P-201ENST00000338964 914 ntBASIC27.85■■■□□ 2.05
ATP6V0A1Q93050 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.85■■■□□ 2.05
ATP6V0A1Q93050 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
ATP6V0A1Q93050 AC004987.1-201ENST00000428627 508 ntBASIC27.84■■■□□ 2.05
ATP6V0A1Q93050 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.84■■■□□ 2.05
ATP6V0A1Q93050 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
ATP6V0A1Q93050 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
ATP6V0A1Q93050 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.83■■■□□ 2.05
ATP6V0A1Q93050 ATP5G2P3-201ENST00000429083 425 ntBASIC27.82■■■□□ 2.04
ATP6V0A1Q93050 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
ATP6V0A1Q93050 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.82■■■□□ 2.04
ATP6V0A1Q93050 AC007029.1-201ENST00000604183 313 ntBASIC27.82■■■□□ 2.04
ATP6V0A1Q93050 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.82■■■□□ 2.04
ATP6V0A1Q93050 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.82■■■□□ 2.04
ATP6V0A1Q93050 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
ATP6V0A1Q93050 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
ATP6V0A1Q93050 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
ATP6V0A1Q93050 LINC01003-201ENST00000564834 1764 ntBASIC27.81■■■□□ 2.04
ATP6V0A1Q93050 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
ATP6V0A1Q93050 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
ATP6V0A1Q93050 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
ATP6V0A1Q93050 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.8■■■□□ 2.04
ATP6V0A1Q93050 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ATP6V0A1Q93050 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.79■■■□□ 2.04
ATP6V0A1Q93050 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.79■■■□□ 2.04
ATP6V0A1Q93050 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ATP6V0A1Q93050 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.79■■■□□ 2.04
ATP6V0A1Q93050 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.79■■■□□ 2.04
ATP6V0A1Q93050 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
ATP6V0A1Q93050 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.79■■■□□ 2.04
ATP6V0A1Q93050 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
ATP6V0A1Q93050 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.79■■■□□ 2.04
ATP6V0A1Q93050 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
ATP6V0A1Q93050 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ATP6V0A1Q93050 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
ATP6V0A1Q93050 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
ATP6V0A1Q93050 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
ATP6V0A1Q93050 WHAMMP3-201ENST00000611636 1609 ntBASIC27.78■■■□□ 2.04
ATP6V0A1Q93050 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ATP6V0A1Q93050 SMPD5-203ENST00000639008 1464 ntBASIC27.77■■■□□ 2.04
ATP6V0A1Q93050 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.77■■■□□ 2.04
ATP6V0A1Q93050 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ATP6V0A1Q93050 AC142086.6-201ENST00000621154 1765 ntBASIC27.77■■■□□ 2.04
ATP6V0A1Q93050 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.77■■■□□ 2.04
ATP6V0A1Q93050 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
ATP6V0A1Q93050 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ATP6V0A1Q93050 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ATP6V0A1Q93050 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ATP6V0A1Q93050 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.75■■■□□ 2.03
ATP6V0A1Q93050 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ATP6V0A1Q93050 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ATP6V0A1Q93050 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ATP6V0A1Q93050 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
ATP6V0A1Q93050 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ATP6V0A1Q93050 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ATP6V0A1Q93050 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ATP6V0A1Q93050 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ATP6V0A1Q93050 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ATP6V0A1Q93050 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ATP6V0A1Q93050 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
ATP6V0A1Q93050 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ATP6V0A1Q93050 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ATP6V0A1Q93050 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ATP6V0A1Q93050 AC133552.2-201ENST00000619106 1032 ntBASIC27.73■■■□□ 2.03
ATP6V0A1Q93050 AC009831.1-201ENST00000580420 1582 ntBASIC27.73■■■□□ 2.03
ATP6V0A1Q93050 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
ATP6V0A1Q93050 BX255925.1-201ENST00000566954 1854 ntBASIC27.72■■■□□ 2.03
ATP6V0A1Q93050 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.72■■■□□ 2.03
ATP6V0A1Q93050 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.71■■■□□ 2.03
ATP6V0A1Q93050 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.71■■■□□ 2.03
ATP6V0A1Q93050 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.7■■■□□ 2.03
ATP6V0A1Q93050 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
ATP6V0A1Q93050 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
ATP6V0A1Q93050 AL592293.1-201ENST00000502889 1188 ntBASIC27.7■■■□□ 2.02
ATP6V0A1Q93050 AC129492.7-201ENST00000622992 756 ntBASIC27.7■■■□□ 2.02
ATP6V0A1Q93050 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
ATP6V0A1Q93050 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.7■■■□□ 2.02
ATP6V0A1Q93050 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.7■■■□□ 2.02
ATP6V0A1Q93050 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.7■■■□□ 2.02
ATP6V0A1Q93050 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ATP6V0A1Q93050 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
ATP6V0A1Q93050 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ATP6V0A1Q93050 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.68■■■□□ 2.02
ATP6V0A1Q93050 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.68■■■□□ 2.02
ATP6V0A1Q93050 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
ATP6V0A1Q93050 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
ATP6V0A1Q93050 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
ATP6V0A1Q93050 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.68■■■□□ 2.02
ATP6V0A1Q93050 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.68■■■□□ 2.02
ATP6V0A1Q93050 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
ATP6V0A1Q93050 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.68■■■□□ 2.02
ATP6V0A1Q93050 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ATP6V0A1Q93050 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ATP6V0A1Q93050 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
ATP6V0A1Q93050 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
ATP6V0A1Q93050 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
ATP6V0A1Q93050 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.67■■■□□ 2.02
ATP6V0A1Q93050 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms