Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RAB40AQ8WXH6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.58■■□□□ 1.04
RAB40AQ8WXH6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAB40AQ8WXH6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.57■■□□□ 1.04
RAB40AQ8WXH6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RAB40AQ8WXH6 LINC01971-201ENST00000617888 1048 ntBASIC21.57■■□□□ 1.04
RAB40AQ8WXH6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.57■■□□□ 1.04
RAB40AQ8WXH6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAB40AQ8WXH6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB40AQ8WXH6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAB40AQ8WXH6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.56■■□□□ 1.04
RAB40AQ8WXH6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
RAB40AQ8WXH6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.56■■□□□ 1.04
RAB40AQ8WXH6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.56■■□□□ 1.04
RAB40AQ8WXH6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40AQ8WXH6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RAB40AQ8WXH6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40AQ8WXH6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40AQ8WXH6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.55■■□□□ 1.04
RAB40AQ8WXH6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40AQ8WXH6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RAB40AQ8WXH6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RAB40AQ8WXH6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB40AQ8WXH6 AC092803.2-201ENST00000564287 1899 ntBASIC21.54■■□□□ 1.04
RAB40AQ8WXH6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.54■■□□□ 1.04
RAB40AQ8WXH6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB40AQ8WXH6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
RAB40AQ8WXH6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.54■■□□□ 1.04
RAB40AQ8WXH6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB40AQ8WXH6 HLA-V-202ENST00000446817 847 ntBASIC21.54■■□□□ 1.04
RAB40AQ8WXH6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB40AQ8WXH6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RAB40AQ8WXH6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RAB40AQ8WXH6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB40AQ8WXH6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.53■■□□□ 1.04
RAB40AQ8WXH6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB40AQ8WXH6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB40AQ8WXH6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAB40AQ8WXH6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAB40AQ8WXH6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB40AQ8WXH6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.52■■□□□ 1.04
RAB40AQ8WXH6 AC093323.1-202ENST00000635031 2045 ntBASIC21.52■■□□□ 1.04
RAB40AQ8WXH6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.52■■□□□ 1.04
RAB40AQ8WXH6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAB40AQ8WXH6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RAB40AQ8WXH6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RAB40AQ8WXH6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAB40AQ8WXH6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.51■■□□□ 1.03
RAB40AQ8WXH6 DUX4L11-201ENST00000611504 1267 ntBASIC21.51■■□□□ 1.03
RAB40AQ8WXH6 DUX4L12-201ENST00000614593 1267 ntBASIC21.51■■□□□ 1.03
RAB40AQ8WXH6 DUX4L14-201ENST00000621227 1267 ntBASIC21.51■■□□□ 1.03
RAB40AQ8WXH6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB40AQ8WXH6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAB40AQ8WXH6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
RAB40AQ8WXH6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAB40AQ8WXH6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.5■■□□□ 1.03
RAB40AQ8WXH6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.5■■□□□ 1.03
RAB40AQ8WXH6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.5■■□□□ 1.03
RAB40AQ8WXH6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.5■■□□□ 1.03
RAB40AQ8WXH6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB40AQ8WXH6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.49■■□□□ 1.03
RAB40AQ8WXH6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RAB40AQ8WXH6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RAB40AQ8WXH6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RAB40AQ8WXH6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40AQ8WXH6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.48■■□□□ 1.03
RAB40AQ8WXH6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40AQ8WXH6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.48■■□□□ 1.03
RAB40AQ8WXH6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40AQ8WXH6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.48■■□□□ 1.03
RAB40AQ8WXH6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40AQ8WXH6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40AQ8WXH6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RAB40AQ8WXH6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RAB40AQ8WXH6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.47■■□□□ 1.03
RAB40AQ8WXH6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.47■■□□□ 1.03
RAB40AQ8WXH6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.47■■□□□ 1.03
RAB40AQ8WXH6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.47■■□□□ 1.03
RAB40AQ8WXH6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAB40AQ8WXH6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RAB40AQ8WXH6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.46■■□□□ 1.03
RAB40AQ8WXH6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RAB40AQ8WXH6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RAB40AQ8WXH6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.45■■□□□ 1.02
RAB40AQ8WXH6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB40AQ8WXH6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB40AQ8WXH6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
RAB40AQ8WXH6 MIR3648-2-201ENST00000581792 180 ntBASIC21.44■■□□□ 1.02
RAB40AQ8WXH6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.44■■□□□ 1.02
RAB40AQ8WXH6 MIR3648-1-201ENST00000615959 180 ntBASIC21.44■■□□□ 1.02
RAB40AQ8WXH6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.44■■□□□ 1.02
RAB40AQ8WXH6 LINC00273-201ENST00000539813 1452 ntBASIC21.44■■□□□ 1.02
RAB40AQ8WXH6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB40AQ8WXH6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB40AQ8WXH6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB40AQ8WXH6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.43■■□□□ 1.02
RAB40AQ8WXH6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.43■■□□□ 1.02
RAB40AQ8WXH6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB40AQ8WXH6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.43■■□□□ 1.02
RAB40AQ8WXH6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms