Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC10.52□□□□□ -0.73
SYNE2Q8WXH0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC10.52□□□□□ -0.73
SYNE2Q8WXH0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SYNE2Q8WXH0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SYNE2Q8WXH0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SYNE2Q8WXH0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SYNE2Q8WXH0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SYNE2Q8WXH0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SYNE2Q8WXH0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
SYNE2Q8WXH0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC10.51□□□□□ -0.73
SYNE2Q8WXH0 MIR219A2-201ENST00000608502 1504 ntBASIC10.51□□□□□ -0.73
SYNE2Q8WXH0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SYNE2Q8WXH0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SYNE2Q8WXH0 AC066615.1-201ENST00000640911 628 ntBASIC10.5□□□□□ -0.73
SYNE2Q8WXH0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC10.5□□□□□ -0.73
SYNE2Q8WXH0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC10.5□□□□□ -0.73
SYNE2Q8WXH0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SYNE2Q8WXH0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SYNE2Q8WXH0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SYNE2Q8WXH0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SYNE2Q8WXH0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SYNE2Q8WXH0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 HLA-L-209ENST00000420110 1011 ntBASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 AC106739.1-201ENST00000617035 715 ntBASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 PBX2P1-201ENST00000493219 1291 ntBASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC10.49□□□□□ -0.73
SYNE2Q8WXH0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC10.48□□□□□ -0.73
SYNE2Q8WXH0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
SYNE2Q8WXH0 AL117332.1-201ENST00000622628 974 ntBASIC10.48□□□□□ -0.73
SYNE2Q8WXH0 MIR4466-201ENST00000606121 54 ntBASIC10.48□□□□□ -0.73
SYNE2Q8WXH0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SYNE2Q8WXH0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC10.48□□□□□ -0.73
SYNE2Q8WXH0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC10.48□□□□□ -0.73
SYNE2Q8WXH0 AC241377.3-202ENST00000626088 1088 ntBASIC10.48□□□□□ -0.73
SYNE2Q8WXH0 AC241585.3-202ENST00000628937 1088 ntBASIC10.48□□□□□ -0.73
SYNE2Q8WXH0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC10.48□□□□□ -0.73
SYNE2Q8WXH0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SYNE2Q8WXH0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 AC018755.3-202ENST00000596210 929 ntBASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 AC022517.1-201ENST00000592429 346 ntBASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC10.47□□□□□ -0.73
SYNE2Q8WXH0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC10.46□□□□□ -0.73
SYNE2Q8WXH0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC10.46□□□□□ -0.73
SYNE2Q8WXH0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SYNE2Q8WXH0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SYNE2Q8WXH0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
SYNE2Q8WXH0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC10.46□□□□□ -0.74
SYNE2Q8WXH0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SYNE2Q8WXH0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
SYNE2Q8WXH0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
SYNE2Q8WXH0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SYNE2Q8WXH0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SYNE2Q8WXH0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SYNE2Q8WXH0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SYNE2Q8WXH0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SYNE2Q8WXH0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
SYNE2Q8WXH0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC10.45□□□□□ -0.74
SYNE2Q8WXH0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
SYNE2Q8WXH0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC10.45□□□□□ -0.74
SYNE2Q8WXH0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC10.45□□□□□ -0.74
SYNE2Q8WXH0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SYNE2Q8WXH0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SYNE2Q8WXH0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SYNE2Q8WXH0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SYNE2Q8WXH0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SYNE2Q8WXH0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC10.44□□□□□ -0.74
SYNE2Q8WXH0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SYNE2Q8WXH0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
SYNE2Q8WXH0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC10.44□□□□□ -0.74
SYNE2Q8WXH0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC10.44□□□□□ -0.74
SYNE2Q8WXH0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC10.44□□□□□ -0.74
SYNE2Q8WXH0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
SYNE2Q8WXH0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
SYNE2Q8WXH0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
SYNE2Q8WXH0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
SYNE2Q8WXH0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SYNE2Q8WXH0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SYNE2Q8WXH0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SYNE2Q8WXH0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
SYNE2Q8WXH0 UNC93B3-201ENST00000308076 687 ntBASIC10.42□□□□□ -0.74
SYNE2Q8WXH0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC10.42□□□□□ -0.74
SYNE2Q8WXH0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
SYNE2Q8WXH0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms