Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC41.41■■■■■ 4.22
CHMP7Q8WUX9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC41.41■■■■■ 4.22
CHMP7Q8WUX9 AC018755.3-202ENST00000596210 929 ntBASIC41.41■■■■■ 4.22
CHMP7Q8WUX9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC41.39■■■■■ 4.22
CHMP7Q8WUX9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC41.39■■■■■ 4.22
CHMP7Q8WUX9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC41.38■■■■■ 4.22
CHMP7Q8WUX9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC41.38■■■■■ 4.21
CHMP7Q8WUX9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC41.37■■■■■ 4.21
CHMP7Q8WUX9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC41.37■■■■■ 4.21
CHMP7Q8WUX9 AC008406.3-201ENST00000620001 1374 ntBASIC41.36■■■■■ 4.21
CHMP7Q8WUX9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC41.35■■■■■ 4.21
CHMP7Q8WUX9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC41.35■■■■■ 4.21
CHMP7Q8WUX9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC41.35■■■■■ 4.21
CHMP7Q8WUX9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC41.34■■■■■ 4.21
CHMP7Q8WUX9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC41.34■■■■■ 4.21
CHMP7Q8WUX9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC41.34■■■■■ 4.21
CHMP7Q8WUX9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC41.33■■■■■ 4.21
CHMP7Q8WUX9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC41.33■■■■■ 4.21
CHMP7Q8WUX9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC41.33■■■■■ 4.21
CHMP7Q8WUX9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC41.33■■■■■ 4.21
CHMP7Q8WUX9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC41.32■■■■■ 4.21
CHMP7Q8WUX9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC41.32■■■■■ 4.21
CHMP7Q8WUX9 MIR3960-201ENST00000583311 91 ntBASIC41.32■■■■■ 4.21
CHMP7Q8WUX9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC41.32■■■■■ 4.2
CHMP7Q8WUX9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC41.31■■■■■ 4.2
CHMP7Q8WUX9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC41.31■■■■■ 4.2
CHMP7Q8WUX9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC41.31■■■■■ 4.2
CHMP7Q8WUX9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC41.3■■■■■ 4.2
CHMP7Q8WUX9 AC239859.2-201ENST00000444165 318 ntBASIC41.3■■■■■ 4.2
CHMP7Q8WUX9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC41.29■■■■■ 4.2
CHMP7Q8WUX9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC41.29■■■■■ 4.2
CHMP7Q8WUX9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC41.29■■■■■ 4.2
CHMP7Q8WUX9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC41.28■■■■■ 4.2
CHMP7Q8WUX9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC41.27■■■■■ 4.2
CHMP7Q8WUX9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC41.27■■■■■ 4.2
CHMP7Q8WUX9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC41.27■■■■■ 4.2
CHMP7Q8WUX9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC41.27■■■■■ 4.2
CHMP7Q8WUX9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC41.27■■■■■ 4.2
CHMP7Q8WUX9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC41.26■■■■■ 4.2
CHMP7Q8WUX9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC41.26■■■■■ 4.2
CHMP7Q8WUX9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC41.26■■■■■ 4.2
CHMP7Q8WUX9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC41.25■■■■■ 4.19
CHMP7Q8WUX9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC41.24■■■■■ 4.19
CHMP7Q8WUX9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC41.24■■■■■ 4.19
CHMP7Q8WUX9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC41.23■■■■■ 4.19
CHMP7Q8WUX9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC41.22■■■■■ 4.19
CHMP7Q8WUX9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC41.22■■■■■ 4.19
CHMP7Q8WUX9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC41.21■■■■■ 4.19
CHMP7Q8WUX9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC41.21■■■■■ 4.19
CHMP7Q8WUX9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC41.21■■■■■ 4.19
CHMP7Q8WUX9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
CHMP7Q8WUX9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
CHMP7Q8WUX9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC41.2■■■■■ 4.19
CHMP7Q8WUX9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC41.18■■■■■ 4.18
CHMP7Q8WUX9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC41.18■■■■■ 4.18
CHMP7Q8WUX9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC41.18■■■■■ 4.18
CHMP7Q8WUX9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC41.18■■■■■ 4.18
CHMP7Q8WUX9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC41.18■■■■■ 4.18
CHMP7Q8WUX9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC41.17■■■■■ 4.18
CHMP7Q8WUX9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC41.16■■■■■ 4.18
CHMP7Q8WUX9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
CHMP7Q8WUX9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC41.15■■■■■ 4.18
CHMP7Q8WUX9 GRAMD4P7-201ENST00000578182 1232 ntBASIC41.15■■■■■ 4.18
CHMP7Q8WUX9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC41.14■■■■■ 4.18
CHMP7Q8WUX9 Z92544.1-202ENST00000571933 1220 ntBASIC41.13■■■■■ 4.17
CHMP7Q8WUX9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC41.13■■■■■ 4.17
CHMP7Q8WUX9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC41.12■■■■■ 4.17
CHMP7Q8WUX9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC41.12■■■■■ 4.17
CHMP7Q8WUX9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC41.11■■■■■ 4.17
CHMP7Q8WUX9 MIR638-201ENST00000385237 100 ntBASIC41.1■■■■■ 4.17
CHMP7Q8WUX9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC41.1■■■■■ 4.17
CHMP7Q8WUX9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC41.09■■■■■ 4.17
CHMP7Q8WUX9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC41.08■■■■■ 4.17
CHMP7Q8WUX9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC41.08■■■■■ 4.17
CHMP7Q8WUX9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC41.08■■■■■ 4.17
CHMP7Q8WUX9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC41.07■■■■■ 4.17
CHMP7Q8WUX9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC41.07■■■■■ 4.16
CHMP7Q8WUX9 AC019171.1-201ENST00000601251 1056 ntBASIC41.06■■■■■ 4.16
CHMP7Q8WUX9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC41.06■■■■■ 4.16
CHMP7Q8WUX9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC41.05■■■■■ 4.16
CHMP7Q8WUX9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC41.05■■■■■ 4.16
CHMP7Q8WUX9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC41.04■■■■■ 4.16
CHMP7Q8WUX9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC41.04■■■■■ 4.16
CHMP7Q8WUX9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC41.03■■■■■ 4.16
CHMP7Q8WUX9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC41.03■■■■■ 4.16
CHMP7Q8WUX9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC41.03■■■■■ 4.16
CHMP7Q8WUX9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC41.02■■■■■ 4.16
CHMP7Q8WUX9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC41.01■■■■■ 4.16
CHMP7Q8WUX9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC41■■■■■ 4.15
CHMP7Q8WUX9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC41■■■■■ 4.15
CHMP7Q8WUX9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC41■■■■■ 4.15
CHMP7Q8WUX9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC40.99■■■■■ 4.15
CHMP7Q8WUX9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC40.99■■■■■ 4.15
CHMP7Q8WUX9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC40.98■■■■■ 4.15
CHMP7Q8WUX9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC40.97■■■■■ 4.15
CHMP7Q8WUX9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC40.97■■■■■ 4.15
CHMP7Q8WUX9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC40.96■■■■■ 4.15
CHMP7Q8WUX9 AC100797.4-201ENST00000631653 1827 ntBASIC40.96■■■■■ 4.15
CHMP7Q8WUX9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC40.96■■■■■ 4.15
CHMP7Q8WUX9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC40.96■■■■■ 4.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms