Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDH19Q8TAB3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH19Q8TAB3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH19Q8TAB3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PCDH19Q8TAB3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH19Q8TAB3 AP004609.3-201ENST00000610705 1884 ntBASIC25.62■■□□□ 1.69
PCDH19Q8TAB3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
PCDH19Q8TAB3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH19Q8TAB3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
PCDH19Q8TAB3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.61■■□□□ 1.69
PCDH19Q8TAB3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH19Q8TAB3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH19Q8TAB3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDH19Q8TAB3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH19Q8TAB3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH19Q8TAB3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDH19Q8TAB3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH19Q8TAB3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH19Q8TAB3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.58■■□□□ 1.69
PCDH19Q8TAB3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH19Q8TAB3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH19Q8TAB3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PCDH19Q8TAB3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
PCDH19Q8TAB3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
PCDH19Q8TAB3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH19Q8TAB3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH19Q8TAB3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
PCDH19Q8TAB3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDH19Q8TAB3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.56■■□□□ 1.68
PCDH19Q8TAB3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
PCDH19Q8TAB3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDH19Q8TAB3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
PCDH19Q8TAB3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH19Q8TAB3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.55■■□□□ 1.68
PCDH19Q8TAB3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDH19Q8TAB3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH19Q8TAB3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH19Q8TAB3 AC142472.1-201ENST00000612013 1741 ntBASIC25.54■■□□□ 1.68
PCDH19Q8TAB3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH19Q8TAB3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH19Q8TAB3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PCDH19Q8TAB3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.54■■□□□ 1.68
PCDH19Q8TAB3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.54■■□□□ 1.68
PCDH19Q8TAB3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH19Q8TAB3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH19Q8TAB3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH19Q8TAB3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH19Q8TAB3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH19Q8TAB3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH19Q8TAB3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDH19Q8TAB3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.53■■□□□ 1.68
PCDH19Q8TAB3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH19Q8TAB3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDH19Q8TAB3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH19Q8TAB3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
PCDH19Q8TAB3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.52■■□□□ 1.68
PCDH19Q8TAB3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDH19Q8TAB3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDH19Q8TAB3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.51■■□□□ 1.67
PCDH19Q8TAB3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH19Q8TAB3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH19Q8TAB3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH19Q8TAB3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH19Q8TAB3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.5■■□□□ 1.67
PCDH19Q8TAB3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
PCDH19Q8TAB3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDH19Q8TAB3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDH19Q8TAB3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDH19Q8TAB3 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDH19Q8TAB3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDH19Q8TAB3 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDH19Q8TAB3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDH19Q8TAB3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.49■■□□□ 1.67
PCDH19Q8TAB3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDH19Q8TAB3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
PCDH19Q8TAB3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH19Q8TAB3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH19Q8TAB3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDH19Q8TAB3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.47■■□□□ 1.67
PCDH19Q8TAB3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDH19Q8TAB3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDH19Q8TAB3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDH19Q8TAB3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
PCDH19Q8TAB3 AL359258.2-201ENST00000564063 1566 ntBASIC25.46■■□□□ 1.67
PCDH19Q8TAB3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDH19Q8TAB3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDH19Q8TAB3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDH19Q8TAB3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDH19Q8TAB3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDH19Q8TAB3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
PCDH19Q8TAB3 AC091060.1-201ENST00000623524 1766 ntBASIC25.44■■□□□ 1.66
PCDH19Q8TAB3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.43■■□□□ 1.66
PCDH19Q8TAB3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PCDH19Q8TAB3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PCDH19Q8TAB3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDH19Q8TAB3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDH19Q8TAB3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDH19Q8TAB3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDH19Q8TAB3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDH19Q8TAB3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms