Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC39.41■■■■□ 3.9
CFAP43Q8NDM7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC39.41■■■■□ 3.9
CFAP43Q8NDM7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC39.4■■■■□ 3.9
CFAP43Q8NDM7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC39.4■■■■□ 3.9
CFAP43Q8NDM7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC39.4■■■■□ 3.9
CFAP43Q8NDM7 GUSBP5-201ENST00000418136 578 ntBASIC39.39■■■■□ 3.9
CFAP43Q8NDM7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC39.38■■■■□ 3.9
CFAP43Q8NDM7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.9
CFAP43Q8NDM7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC39.38■■■■□ 3.89
CFAP43Q8NDM7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC39.38■■■■□ 3.89
CFAP43Q8NDM7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.89
CFAP43Q8NDM7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.89
CFAP43Q8NDM7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC39.38■■■■□ 3.89
CFAP43Q8NDM7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
CFAP43Q8NDM7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
CFAP43Q8NDM7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC39.36■■■■□ 3.89
CFAP43Q8NDM7 HES6-204ENST00000409182 863 ntTSL 2 BASIC39.36■■■■□ 3.89
CFAP43Q8NDM7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC39.36■■■■□ 3.89
CFAP43Q8NDM7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
CFAP43Q8NDM7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC39.36■■■■□ 3.89
CFAP43Q8NDM7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC39.35■■■■□ 3.89
CFAP43Q8NDM7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC39.35■■■■□ 3.89
CFAP43Q8NDM7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
CFAP43Q8NDM7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC39.34■■■■□ 3.89
CFAP43Q8NDM7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC39.34■■■■□ 3.89
CFAP43Q8NDM7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC39.33■■■■□ 3.89
CFAP43Q8NDM7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC39.33■■■■□ 3.89
CFAP43Q8NDM7 AC025884.2-201ENST00000553429 711 ntBASIC39.33■■■■□ 3.89
CFAP43Q8NDM7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
CFAP43Q8NDM7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC39.33■■■■□ 3.89
CFAP43Q8NDM7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
CFAP43Q8NDM7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC39.32■■■■□ 3.88
CFAP43Q8NDM7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC39.3■■■■□ 3.88
CFAP43Q8NDM7 AC026202.3-201ENST00000600805 1127 ntBASIC39.3■■■■□ 3.88
CFAP43Q8NDM7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC39.3■■■■□ 3.88
CFAP43Q8NDM7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC39.29■■■■□ 3.88
CFAP43Q8NDM7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
CFAP43Q8NDM7 SPCS2P3-201ENST00000500401 656 ntBASIC39.29■■■■□ 3.88
CFAP43Q8NDM7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
CFAP43Q8NDM7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC39.29■■■■□ 3.88
CFAP43Q8NDM7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC39.29■■■■□ 3.88
CFAP43Q8NDM7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC39.29■■■■□ 3.88
CFAP43Q8NDM7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
CFAP43Q8NDM7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
CFAP43Q8NDM7 KRT8P33-201ENST00000508125 1423 ntBASIC39.28■■■■□ 3.88
CFAP43Q8NDM7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
CFAP43Q8NDM7 THA1P-201ENST00000590384 1145 ntBASIC39.28■■■■□ 3.88
CFAP43Q8NDM7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
CFAP43Q8NDM7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
CFAP43Q8NDM7 AC010980.1-201ENST00000587192 1142 ntBASIC39.27■■■■□ 3.88
CFAP43Q8NDM7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC39.27■■■■□ 3.88
CFAP43Q8NDM7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC39.26■■■■□ 3.88
CFAP43Q8NDM7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
CFAP43Q8NDM7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC39.26■■■■□ 3.88
CFAP43Q8NDM7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC39.26■■■■□ 3.88
CFAP43Q8NDM7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC39.25■■■■□ 3.87
CFAP43Q8NDM7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC39.25■■■■□ 3.87
CFAP43Q8NDM7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC39.25■■■■□ 3.87
CFAP43Q8NDM7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
CFAP43Q8NDM7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC39.24■■■■□ 3.87
CFAP43Q8NDM7 RAP2CP1-202ENST00000605179 643 ntBASIC39.24■■■■□ 3.87
CFAP43Q8NDM7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC39.24■■■■□ 3.87
CFAP43Q8NDM7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC39.23■■■■□ 3.87
CFAP43Q8NDM7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
CFAP43Q8NDM7 RP9P-202ENST00000450133 1212 ntBASIC39.22■■■■□ 3.87
CFAP43Q8NDM7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC39.22■■■■□ 3.87
CFAP43Q8NDM7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC39.22■■■■□ 3.87
CFAP43Q8NDM7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC39.22■■■■□ 3.87
CFAP43Q8NDM7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
CFAP43Q8NDM7 OR2A1-AS1-204ENST00000470435 602 ntBASIC39.21■■■■□ 3.87
CFAP43Q8NDM7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
CFAP43Q8NDM7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC39.2■■■■□ 3.87
CFAP43Q8NDM7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC39.2■■■■□ 3.87
CFAP43Q8NDM7 AC074183.2-201ENST00000623112 922 ntBASIC39.2■■■■□ 3.87
CFAP43Q8NDM7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
CFAP43Q8NDM7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC39.19■■■■□ 3.86
CFAP43Q8NDM7 MIR4508-201ENST00000584178 70 ntBASIC39.19■■■■□ 3.86
CFAP43Q8NDM7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC39.19■■■■□ 3.86
CFAP43Q8NDM7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
CFAP43Q8NDM7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC39.19■■■■□ 3.86
CFAP43Q8NDM7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC39.19■■■■□ 3.86
CFAP43Q8NDM7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC39.18■■■■□ 3.86
CFAP43Q8NDM7 AC093536.1-201ENST00000569153 554 ntBASIC39.18■■■■□ 3.86
CFAP43Q8NDM7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC39.18■■■■□ 3.86
CFAP43Q8NDM7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC39.18■■■■□ 3.86
CFAP43Q8NDM7 SMPD5-203ENST00000639008 1464 ntBASIC39.18■■■■□ 3.86
CFAP43Q8NDM7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC39.17■■■■□ 3.86
CFAP43Q8NDM7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
CFAP43Q8NDM7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC39.16■■■■□ 3.86
CFAP43Q8NDM7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
CFAP43Q8NDM7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC39.16■■■■□ 3.86
CFAP43Q8NDM7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC39.16■■■■□ 3.86
CFAP43Q8NDM7 AC103834.1-201ENST00000520383 144 ntBASIC39.16■■■■□ 3.86
CFAP43Q8NDM7 PVT1_1.1-201ENST00000615125 194 ntBASIC39.15■■■■□ 3.86
CFAP43Q8NDM7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
CFAP43Q8NDM7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
CFAP43Q8NDM7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC39.14■■■■□ 3.86
CFAP43Q8NDM7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
CFAP43Q8NDM7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
CFAP43Q8NDM7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC39.13■■■■□ 3.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms