Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
NANOGP1Q8N7R0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NANOGP1Q8N7R0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
NANOGP1Q8N7R0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NANOGP1Q8N7R0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.01■■□□□ 1.11
NANOGP1Q8N7R0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
NANOGP1Q8N7R0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
NANOGP1Q8N7R0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NANOGP1Q8N7R0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
NANOGP1Q8N7R0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NANOGP1Q8N7R0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
NANOGP1Q8N7R0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NANOGP1Q8N7R0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NANOGP1Q8N7R0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
NANOGP1Q8N7R0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22■■□□□ 1.11
NANOGP1Q8N7R0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
NANOGP1Q8N7R0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NANOGP1Q8N7R0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22■■□□□ 1.11
NANOGP1Q8N7R0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22■■□□□ 1.11
NANOGP1Q8N7R0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NANOGP1Q8N7R0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NANOGP1Q8N7R0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NANOGP1Q8N7R0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.99■■□□□ 1.11
NANOGP1Q8N7R0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NANOGP1Q8N7R0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NANOGP1Q8N7R0 LINC00273-201ENST00000539813 1452 ntBASIC21.99■■□□□ 1.11
NANOGP1Q8N7R0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NANOGP1Q8N7R0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
NANOGP1Q8N7R0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NANOGP1Q8N7R0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NANOGP1Q8N7R0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NANOGP1Q8N7R0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NANOGP1Q8N7R0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NANOGP1Q8N7R0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NANOGP1Q8N7R0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NANOGP1Q8N7R0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NANOGP1Q8N7R0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NANOGP1Q8N7R0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NANOGP1Q8N7R0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NANOGP1Q8N7R0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.97■■□□□ 1.11
NANOGP1Q8N7R0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NANOGP1Q8N7R0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NANOGP1Q8N7R0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NANOGP1Q8N7R0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.96■■□□□ 1.11
NANOGP1Q8N7R0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.95■■□□□ 1.1
NANOGP1Q8N7R0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NANOGP1Q8N7R0 MIR762-201ENST00000390236 83 ntBASIC21.95■■□□□ 1.1
NANOGP1Q8N7R0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.95■■□□□ 1.1
NANOGP1Q8N7R0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NANOGP1Q8N7R0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.95■■□□□ 1.1
NANOGP1Q8N7R0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.95■■□□□ 1.1
NANOGP1Q8N7R0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NANOGP1Q8N7R0 AC142381.3-201ENST00000568208 1670 ntBASIC21.95■■□□□ 1.1
NANOGP1Q8N7R0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NANOGP1Q8N7R0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NANOGP1Q8N7R0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NANOGP1Q8N7R0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.94■■□□□ 1.1
NANOGP1Q8N7R0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.94■■□□□ 1.1
NANOGP1Q8N7R0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
NANOGP1Q8N7R0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NANOGP1Q8N7R0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NANOGP1Q8N7R0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NANOGP1Q8N7R0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NANOGP1Q8N7R0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NANOGP1Q8N7R0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
NANOGP1Q8N7R0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.92■■□□□ 1.1
NANOGP1Q8N7R0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NANOGP1Q8N7R0 AC010501.1-201ENST00000606270 1962 ntBASIC21.92■■□□□ 1.1
NANOGP1Q8N7R0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NANOGP1Q8N7R0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NANOGP1Q8N7R0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
NANOGP1Q8N7R0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
NANOGP1Q8N7R0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.91■■□□□ 1.1
NANOGP1Q8N7R0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NANOGP1Q8N7R0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
NANOGP1Q8N7R0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
NANOGP1Q8N7R0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NANOGP1Q8N7R0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NANOGP1Q8N7R0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.9■■□□□ 1.1
NANOGP1Q8N7R0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NANOGP1Q8N7R0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NANOGP1Q8N7R0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NANOGP1Q8N7R0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NANOGP1Q8N7R0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NANOGP1Q8N7R0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NANOGP1Q8N7R0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NANOGP1Q8N7R0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NANOGP1Q8N7R0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NANOGP1Q8N7R0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.89■■□□□ 1.09
NANOGP1Q8N7R0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NANOGP1Q8N7R0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NANOGP1Q8N7R0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
NANOGP1Q8N7R0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NANOGP1Q8N7R0 AC136428.2-201ENST00000563187 214 ntBASIC21.88■■□□□ 1.09
NANOGP1Q8N7R0 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.88■■□□□ 1.09
NANOGP1Q8N7R0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NANOGP1Q8N7R0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NANOGP1Q8N7R0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
NANOGP1Q8N7R0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NANOGP1Q8N7R0 WHAMMP3-201ENST00000611636 1609 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms