Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
DHX40Q8IX18 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
DHX40Q8IX18 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
DHX40Q8IX18 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.51■■□□□ 1.99
DHX40Q8IX18 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
DHX40Q8IX18 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
DHX40Q8IX18 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.5■■□□□ 1.99
DHX40Q8IX18 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
DHX40Q8IX18 AC093323.1-202ENST00000635031 2045 ntBASIC27.5■■□□□ 1.99
DHX40Q8IX18 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
DHX40Q8IX18 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.49■■□□□ 1.99
DHX40Q8IX18 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
DHX40Q8IX18 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
DHX40Q8IX18 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.49■■□□□ 1.99
DHX40Q8IX18 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
DHX40Q8IX18 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
DHX40Q8IX18 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
DHX40Q8IX18 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
DHX40Q8IX18 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
DHX40Q8IX18 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.47■■□□□ 1.99
DHX40Q8IX18 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
DHX40Q8IX18 AC087741.3-201ENST00000624270 1347 ntBASIC27.46■■□□□ 1.99
DHX40Q8IX18 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
DHX40Q8IX18 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
DHX40Q8IX18 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC27.46■■□□□ 1.99
DHX40Q8IX18 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.46■■□□□ 1.99
DHX40Q8IX18 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
DHX40Q8IX18 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.45■■□□□ 1.99
DHX40Q8IX18 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.45■■□□□ 1.99
DHX40Q8IX18 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
DHX40Q8IX18 AC110285.7-201ENST00000624417 1536 ntBASIC27.45■■□□□ 1.98
DHX40Q8IX18 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
DHX40Q8IX18 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
DHX40Q8IX18 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
DHX40Q8IX18 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
DHX40Q8IX18 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
DHX40Q8IX18 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
DHX40Q8IX18 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.43■■□□□ 1.98
DHX40Q8IX18 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
DHX40Q8IX18 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
DHX40Q8IX18 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
DHX40Q8IX18 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.43■■□□□ 1.98
DHX40Q8IX18 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.43■■□□□ 1.98
DHX40Q8IX18 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
DHX40Q8IX18 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
DHX40Q8IX18 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
DHX40Q8IX18 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
DHX40Q8IX18 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
DHX40Q8IX18 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
DHX40Q8IX18 WHAMMP3-201ENST00000611636 1609 ntBASIC27.42■■□□□ 1.98
DHX40Q8IX18 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.42■■□□□ 1.98
DHX40Q8IX18 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
DHX40Q8IX18 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.42■■□□□ 1.98
DHX40Q8IX18 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.41■■□□□ 1.98
DHX40Q8IX18 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
DHX40Q8IX18 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.41■■□□□ 1.98
DHX40Q8IX18 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.4■■□□□ 1.98
DHX40Q8IX18 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.4■■□□□ 1.98
DHX40Q8IX18 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
DHX40Q8IX18 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.4■■□□□ 1.98
DHX40Q8IX18 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
DHX40Q8IX18 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
DHX40Q8IX18 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.39■■□□□ 1.98
DHX40Q8IX18 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC27.39■■□□□ 1.98
DHX40Q8IX18 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.39■■□□□ 1.97
DHX40Q8IX18 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.38■■□□□ 1.97
DHX40Q8IX18 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
DHX40Q8IX18 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
DHX40Q8IX18 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
DHX40Q8IX18 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
DHX40Q8IX18 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.38■■□□□ 1.97
DHX40Q8IX18 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
DHX40Q8IX18 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
DHX40Q8IX18 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
DHX40Q8IX18 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
DHX40Q8IX18 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
DHX40Q8IX18 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.37■■□□□ 1.97
DHX40Q8IX18 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
DHX40Q8IX18 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
DHX40Q8IX18 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
DHX40Q8IX18 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
DHX40Q8IX18 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
DHX40Q8IX18 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.35■■□□□ 1.97
DHX40Q8IX18 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DHX40Q8IX18 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
DHX40Q8IX18 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.35■■□□□ 1.97
DHX40Q8IX18 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
DHX40Q8IX18 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DHX40Q8IX18 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
DHX40Q8IX18 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
DHX40Q8IX18 ERN1-208ENST00000606895 2068 ntBASIC27.34■■□□□ 1.97
DHX40Q8IX18 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
DHX40Q8IX18 AC044849.2-201ENST00000606596 710 ntBASIC27.34■■□□□ 1.97
DHX40Q8IX18 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
DHX40Q8IX18 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
DHX40Q8IX18 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.33■■□□□ 1.97
DHX40Q8IX18 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
DHX40Q8IX18 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
DHX40Q8IX18 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
DHX40Q8IX18 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms