Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 SNHG16-202ENST00000493536 2424 ntTSL 1 (best)8.35□□□□□ -1.079e-20■■■■■ 27.5
PHF6Q8IWS0 GET4-206ENST00000464468 676 ntTSL 319.38■□□□□ 0.694e-7■■■■■ 27.5
PHF6Q8IWS0 TCF3-210ENST00000587235 986 ntTSL 529.3■■■□□ 2.281e-6■■■■■ 27.4
PHF6Q8IWS0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.17■□□□□ 0.981e-6■■■■■ 27.4
PHF6Q8IWS0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.44■□□□□ 0.221e-6■■■■■ 27.4
PHF6Q8IWS0 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.775e-7■■■■■ 27.3
PHF6Q8IWS0 ZDHHC8-205ENST00000468112 524 ntTSL 316.78■□□□□ 0.283e-6■■■■■ 27.2
PHF6Q8IWS0 ZDHHC8-204ENST00000436518 557 ntTSL 416.48■□□□□ 0.233e-6■■■■■ 27.2
PHF6Q8IWS0 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.471e-6■■■■■ 27
PHF6Q8IWS0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.54■□□□□ 0.882e-6■■■■■ 26.9
PHF6Q8IWS0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.87■□□□□ 0.612e-6■■■■■ 26.9
PHF6Q8IWS0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.51■□□□□ 0.552e-6■■■■■ 26.9
PHF6Q8IWS0 snoU2-30.1-201ENST00000365012 70 ntBASIC2.79□□□□□ -1.961e-8■■■■□ 26.5
PHF6Q8IWS0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.311e-6■■■■□ 26.4
PHF6Q8IWS0 ANKRD11-204ENST00000378332 1982 ntTSL 220.07■□□□□ 0.81e-6■■■■□ 26.4
PHF6Q8IWS0 ANKRD11-209ENST00000564553 471 ntTSL 314.87□□□□□ -0.031e-6■■■■□ 26.4
PHF6Q8IWS0 ANKRD11-207ENST00000562816 573 ntTSL 413.95□□□□□ -0.181e-6■■■■□ 26.4
PHF6Q8IWS0 ANKRD11-206ENST00000562275 2762 ntTSL 513.33□□□□□ -0.271e-6■■■■□ 26.4
PHF6Q8IWS0 ANKRD11-202ENST00000330736 8342 ntTSL 512.95□□□□□ -0.341e-6■■■■□ 26.4
PHF6Q8IWS0 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.381e-6■■■■□ 26.4
PHF6Q8IWS0 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.411e-6■■■■□ 26.4
PHF6Q8IWS0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.925e-8■■■■□ 26.2
PHF6Q8IWS0 C7orf50-204ENST00000412051 1147 ntAPPRIS ALT2 TSL 225.93■■□□□ 1.745e-8■■■■□ 26.2
PHF6Q8IWS0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.66■■□□□ 1.385e-8■■■■□ 26.2
PHF6Q8IWS0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.81■■□□□ 1.245e-8■■■■□ 26.2
PHF6Q8IWS0 C7orf50-208ENST00000491163 621 ntAPPRIS ALT2 TSL 322.09■■□□□ 1.135e-8■■■■□ 26.2
PHF6Q8IWS0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.985e-8■■■■□ 26.2
PHF6Q8IWS0 C7orf50-207ENST00000488073 853 ntTSL 520.87■□□□□ 0.935e-8■■■■□ 26.2
PHF6Q8IWS0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.83■□□□□ 0.775e-8■■■■□ 26.2
PHF6Q8IWS0 MATR3-213ENST00000508689 561 ntTSL 418.19■□□□□ 0.55e-8■■■■□ 26.2
PHF6Q8IWS0 C7orf50-205ENST00000444428 507 ntAPPRIS ALT2 TSL 317.95■□□□□ 0.465e-8■■■■□ 26.2
PHF6Q8IWS0 ZEB2-202ENST00000392861 1514 ntTSL 1 (best)14.34□□□□□ -0.112e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.132e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-230ENST00000629955 1435 ntTSL 514.03□□□□□ -0.162e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-231ENST00000630572 468 ntTSL 513.64□□□□□ -0.232e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-237ENST00000636732 5073 ntTSL 513.44□□□□□ -0.262e-6■■■■□ 26.2
PHF6Q8IWS0 AKT1-212ENST00000555380 534 ntTSL 413.43□□□□□ -0.265e-7■■■■□ 26.2
PHF6Q8IWS0 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.282e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-207ENST00000431672 709 ntTSL 411.58□□□□□ -0.562e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-214ENST00000462355 656 ntTSL 4 BASIC11.38□□□□□ -0.592e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-212ENST00000453352 581 ntTSL 310.8□□□□□ -0.682e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-209ENST00000435831 554 ntTSL 410.46□□□□□ -0.732e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-235ENST00000636445 2947 ntTSL 510.32□□□□□ -0.762e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-217ENST00000470879 2648 ntTSL 1 (best) BASIC10.15□□□□□ -0.792e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-220ENST00000476394 601 ntTSL 310.06□□□□□ -0.82e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-222ENST00000484313 845 ntTSL 1 (best)9.99□□□□□ -0.812e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-224ENST00000539609 4061 ntTSL 2 BASIC9.96□□□□□ -0.822e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC9.31□□□□□ -0.922e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.952e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC9.08□□□□□ -0.962e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-211ENST00000444559 577 ntTSL 48.9□□□□□ -0.982e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-208ENST00000434448 583 ntTSL 58.84□□□□□ -0.992e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-216ENST00000465308 1071 ntTSL 58.84□□□□□ -0.992e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC8.79□□□□□ -12e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC8.5□□□□□ -1.052e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC8.45□□□□□ -1.062e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-203ENST00000409211 587 ntTSL 47.99□□□□□ -1.132e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-206ENST00000427902 2236 ntTSL 1 (best)7.51□□□□□ -1.212e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.232e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.29□□□□□ -1.242e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-240ENST00000637267 2677 ntTSL 57.08□□□□□ -1.282e-6■■■■□ 26.2
PHF6Q8IWS0 FAR2P4-202ENST00000425399 584 ntBASIC6.77□□□□□ -1.335e-8■■■■□ 26.2
PHF6Q8IWS0 ZEB2-218ENST00000472146 3837 ntTSL 1 (best)4.37□□□□□ -1.712e-6■■■■□ 26.2
PHF6Q8IWS0 ZEB2-213ENST00000461784 751 ntTSL 34.17□□□□□ -1.742e-6■■■■□ 26.2
PHF6Q8IWS0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.213e-6■■■■□ 26.2
PHF6Q8IWS0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.91□□□□□ -0.183e-6■■■■□ 26.2
PHF6Q8IWS0 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.53□□□□□ -0.243e-6■■■■□ 26.2
PHF6Q8IWS0 KDM4B-205ENST00000588337 504 ntTSL 530.69■■■□□ 2.54e-6■■■■□ 26.2
PHF6Q8IWS0 HNRNPF-206ENST00000498176 715 ntTSL 1 (best)24.49■■□□□ 1.518e-7■■■■□ 26.2
PHF6Q8IWS0 HNRNPF-205ENST00000477108 636 ntTSL 1 (best)17■□□□□ 0.318e-7■■■■□ 26.2
PHF6Q8IWS0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.138e-7■■■■□ 26.2
PHF6Q8IWS0 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.468e-7■■■■□ 26.2
PHF6Q8IWS0 ARVCF-207ENST00000473551 2108 ntTSL 218.62■□□□□ 0.571e-6■■■■□ 26.2
PHF6Q8IWS0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.161e-6■■■■□ 26.2
PHF6Q8IWS0 CAPN15-202ENST00000562370 942 ntTSL 231.54■■■□□ 2.642e-6■■■■□ 26.2
PHF6Q8IWS0 CAPN15-207ENST00000568988 911 ntTSL 331.54■■■□□ 2.642e-6■■■■□ 26.2
PHF6Q8IWS0 PTP4A3-205ENST00000523147 558 ntTSL 523.89■■□□□ 1.412e-6■■■■□ 26.1
PHF6Q8IWS0 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.62e-6■■■■□ 26.1
PHF6Q8IWS0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.582e-6■■■■□ 26.1
PHF6Q8IWS0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.535e-67■■■■□ 26
PHF6Q8IWS0 RPS12-202ENST00000484616 639 ntTSL 25.82□□□□□ -1.485e-67■■■■□ 26
PHF6Q8IWS0 SNORD101-201ENST00000384027 73 ntBASIC1.56□□□□□ -2.165e-67■■■■□ 26
PHF6Q8IWS0 ZFPM1-202ENST00000562417 497 ntTSL 318.75■□□□□ 0.592e-6■■■■□ 25.9
PHF6Q8IWS0 MT-TY-201ENST00000387409 66 ntBASIC1.17□□□□□ -2.221e-323■■■■□ 25.8
PHF6Q8IWS0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.66■■□□□ 1.385e-8■■■■□ 25.8
PHF6Q8IWS0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.993e-6■■■■□ 25.8
PHF6Q8IWS0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.25■□□□□ 0.673e-6■■■■□ 25.8
PHF6Q8IWS0 EEF1D-222ENST00000528519 553 ntTSL 318.65■□□□□ 0.583e-6■■■■□ 25.8
PHF6Q8IWS0 EEF1D-214ENST00000526135 535 ntTSL 214.49□□□□□ -0.093e-6■■■■□ 25.8
PHF6Q8IWS0 ZYX-202ENST00000354434 2050 ntAPPRIS ALT2 TSL 214.3□□□□□ -0.123e-6■■■■□ 25.8
PHF6Q8IWS0 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.33e-6■■■■□ 25.8
PHF6Q8IWS0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.6■□□□□ 0.412e-6■■■■□ 25.8
PHF6Q8IWS0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.212e-6■■■■□ 25.8
PHF6Q8IWS0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.85■□□□□ 0.132e-6■■■■□ 25.8
PHF6Q8IWS0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.32■□□□□ 0.042e-6■■■■□ 25.8
PHF6Q8IWS0 GSE1-215ENST00000635906 666 ntTSL 314.01□□□□□ -0.172e-6■■■■□ 25.8
PHF6Q8IWS0 VARS-220ENST00000461874 845 ntTSL 521.75■■□□□ 1.072e-6■■■■□ 25.6
PHF6Q8IWS0 VARS-216ENST00000428445 863 ntTSL 519.78■□□□□ 0.762e-6■■■■□ 25.6
PHF6Q8IWS0 VARS-223ENST00000474643 885 ntTSL 517.49■□□□□ 0.392e-6■■■■□ 25.6
PHF6Q8IWS0 VARS-226ENST00000483275 450 ntTSL 316.64■□□□□ 0.252e-6■■■■□ 25.6
Retrieved 100 of 4,170 protein–RNA pairs in 245.6 ms