Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 AC007029.1-201ENST00000604183 313 ntBASIC26.32■■□□□ 1.8
LRRTM3Q86VH5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
LRRTM3Q86VH5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.32■■□□□ 1.8
LRRTM3Q86VH5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LRRTM3Q86VH5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LRRTM3Q86VH5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.31■■□□□ 1.8
LRRTM3Q86VH5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
LRRTM3Q86VH5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LRRTM3Q86VH5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.31■■□□□ 1.8
LRRTM3Q86VH5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LRRTM3Q86VH5 WHAMMP3-201ENST00000611636 1609 ntBASIC26.31■■□□□ 1.8
LRRTM3Q86VH5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
LRRTM3Q86VH5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
LRRTM3Q86VH5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LRRTM3Q86VH5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRTM3Q86VH5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRTM3Q86VH5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LRRTM3Q86VH5 LINC01003-201ENST00000564834 1764 ntBASIC26.29■■□□□ 1.8
LRRTM3Q86VH5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.29■■□□□ 1.8
LRRTM3Q86VH5 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.29■■□□□ 1.8
LRRTM3Q86VH5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LRRTM3Q86VH5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.29■■□□□ 1.8
LRRTM3Q86VH5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LRRTM3Q86VH5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
LRRTM3Q86VH5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
LRRTM3Q86VH5 KRT18P60-201ENST00000312876 1297 ntBASIC26.27■■□□□ 1.8
LRRTM3Q86VH5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.27■■□□□ 1.8
LRRTM3Q86VH5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LRRTM3Q86VH5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
LRRTM3Q86VH5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LRRTM3Q86VH5 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LRRTM3Q86VH5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.26■■□□□ 1.79
LRRTM3Q86VH5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LRRTM3Q86VH5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LRRTM3Q86VH5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LRRTM3Q86VH5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
LRRTM3Q86VH5 AL359504.2-201ENST00000605506 1601 ntBASIC26.25■■□□□ 1.79
LRRTM3Q86VH5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LRRTM3Q86VH5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.24■■□□□ 1.79
LRRTM3Q86VH5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.24■■□□□ 1.79
LRRTM3Q86VH5 AC009831.1-201ENST00000580420 1582 ntBASIC26.24■■□□□ 1.79
LRRTM3Q86VH5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
LRRTM3Q86VH5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRRTM3Q86VH5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LRRTM3Q86VH5 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRRTM3Q86VH5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LRRTM3Q86VH5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
LRRTM3Q86VH5 AC012354.3-201ENST00000623734 483 ntBASIC26.23■■□□□ 1.79
LRRTM3Q86VH5 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRRTM3Q86VH5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.23■■□□□ 1.79
LRRTM3Q86VH5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LRRTM3Q86VH5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.22■■□□□ 1.79
LRRTM3Q86VH5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.22■■□□□ 1.79
LRRTM3Q86VH5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LRRTM3Q86VH5 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.21■■□□□ 1.79
LRRTM3Q86VH5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.21■■□□□ 1.79
LRRTM3Q86VH5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.2■■□□□ 1.79
LRRTM3Q86VH5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
LRRTM3Q86VH5 AC026202.3-201ENST00000600805 1127 ntBASIC26.2■■□□□ 1.78
LRRTM3Q86VH5 AC133552.2-201ENST00000619106 1032 ntBASIC26.2■■□□□ 1.78
LRRTM3Q86VH5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
LRRTM3Q86VH5 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
LRRTM3Q86VH5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
LRRTM3Q86VH5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
LRRTM3Q86VH5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.19■■□□□ 1.78
LRRTM3Q86VH5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
LRRTM3Q86VH5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
LRRTM3Q86VH5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.18■■□□□ 1.78
LRRTM3Q86VH5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
LRRTM3Q86VH5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
LRRTM3Q86VH5 RP9P-202ENST00000450133 1212 ntBASIC26.18■■□□□ 1.78
LRRTM3Q86VH5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.18■■□□□ 1.78
LRRTM3Q86VH5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
LRRTM3Q86VH5 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.18■■□□□ 1.78
LRRTM3Q86VH5 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.18■■□□□ 1.78
LRRTM3Q86VH5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.17■■□□□ 1.78
LRRTM3Q86VH5 AL449106.1-201ENST00000608517 1980 ntBASIC26.17■■□□□ 1.78
LRRTM3Q86VH5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
LRRTM3Q86VH5 AL033527.3-201ENST00000566366 1196 ntBASIC26.17■■□□□ 1.78
LRRTM3Q86VH5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.17■■□□□ 1.78
LRRTM3Q86VH5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LRRTM3Q86VH5 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.16■■□□□ 1.78
LRRTM3Q86VH5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRRTM3Q86VH5 AL592293.1-201ENST00000502889 1188 ntBASIC26.16■■□□□ 1.78
LRRTM3Q86VH5 AC093536.1-201ENST00000569153 554 ntBASIC26.16■■□□□ 1.78
LRRTM3Q86VH5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
LRRTM3Q86VH5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRRTM3Q86VH5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
LRRTM3Q86VH5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
LRRTM3Q86VH5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
LRRTM3Q86VH5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LRRTM3Q86VH5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LRRTM3Q86VH5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.15■■□□□ 1.78
LRRTM3Q86VH5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
LRRTM3Q86VH5 AC142086.6-201ENST00000621154 1765 ntBASIC26.15■■□□□ 1.78
LRRTM3Q86VH5 BX255925.1-201ENST00000566954 1854 ntBASIC26.15■■□□□ 1.78
LRRTM3Q86VH5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
LRRTM3Q86VH5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
LRRTM3Q86VH5 AC004987.1-201ENST00000428627 508 ntBASIC26.14■■□□□ 1.78
LRRTM3Q86VH5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms