Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COLCA1Q6ZS62 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COLCA1Q6ZS62 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COLCA1Q6ZS62 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COLCA1Q6ZS62 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COLCA1Q6ZS62 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COLCA1Q6ZS62 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.41■■□□□ 1.02
COLCA1Q6ZS62 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COLCA1Q6ZS62 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COLCA1Q6ZS62 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COLCA1Q6ZS62 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COLCA1Q6ZS62 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.4■■□□□ 1.02
COLCA1Q6ZS62 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COLCA1Q6ZS62 AP004609.3-201ENST00000610705 1884 ntBASIC21.4■■□□□ 1.02
COLCA1Q6ZS62 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
COLCA1Q6ZS62 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COLCA1Q6ZS62 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COLCA1Q6ZS62 AC142472.1-201ENST00000612013 1741 ntBASIC21.39■■□□□ 1.01
COLCA1Q6ZS62 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COLCA1Q6ZS62 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COLCA1Q6ZS62 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COLCA1Q6ZS62 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
COLCA1Q6ZS62 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.37■■□□□ 1.01
COLCA1Q6ZS62 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.37■■□□□ 1.01
COLCA1Q6ZS62 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COLCA1Q6ZS62 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COLCA1Q6ZS62 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COLCA1Q6ZS62 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
COLCA1Q6ZS62 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COLCA1Q6ZS62 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.37■■□□□ 1.01
COLCA1Q6ZS62 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.37■■□□□ 1.01
COLCA1Q6ZS62 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.37■■□□□ 1.01
COLCA1Q6ZS62 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COLCA1Q6ZS62 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COLCA1Q6ZS62 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.36■■□□□ 1.01
COLCA1Q6ZS62 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COLCA1Q6ZS62 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.36■■□□□ 1.01
COLCA1Q6ZS62 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COLCA1Q6ZS62 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COLCA1Q6ZS62 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COLCA1Q6ZS62 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.35■■□□□ 1.01
COLCA1Q6ZS62 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.35■■□□□ 1.01
COLCA1Q6ZS62 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.35■■□□□ 1.01
COLCA1Q6ZS62 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
COLCA1Q6ZS62 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.35■■□□□ 1.01
COLCA1Q6ZS62 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COLCA1Q6ZS62 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLCA1Q6ZS62 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLCA1Q6ZS62 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COLCA1Q6ZS62 AL359258.2-201ENST00000564063 1566 ntBASIC21.34■■□□□ 1.01
COLCA1Q6ZS62 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COLCA1Q6ZS62 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
COLCA1Q6ZS62 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
COLCA1Q6ZS62 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COLCA1Q6ZS62 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.32■■□□□ 1
COLCA1Q6ZS62 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
COLCA1Q6ZS62 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.32■■□□□ 1
COLCA1Q6ZS62 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COLCA1Q6ZS62 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COLCA1Q6ZS62 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COLCA1Q6ZS62 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.31■■□□□ 1
COLCA1Q6ZS62 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COLCA1Q6ZS62 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.31■■□□□ 1
COLCA1Q6ZS62 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.3■■□□□ 1
COLCA1Q6ZS62 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
COLCA1Q6ZS62 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.3■■□□□ 1
COLCA1Q6ZS62 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.3■■□□□ 1
COLCA1Q6ZS62 AC126177.7-201ENST00000547904 679 ntBASIC21.3■■□□□ 1
COLCA1Q6ZS62 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.3■■□□□ 1
COLCA1Q6ZS62 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.29■■□□□ 1
COLCA1Q6ZS62 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.29■■□□□ 1
COLCA1Q6ZS62 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.29■■□□□ 1
COLCA1Q6ZS62 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.29■■□□□ 1
COLCA1Q6ZS62 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.29■■□□□ 1
COLCA1Q6ZS62 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.29■■□□□ 1
COLCA1Q6ZS62 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.29■■□□□ 1
COLCA1Q6ZS62 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.29■■□□□ 1
COLCA1Q6ZS62 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COLCA1Q6ZS62 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COLCA1Q6ZS62 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COLCA1Q6ZS62 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COLCA1Q6ZS62 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.28■■□□□ 1
COLCA1Q6ZS62 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.28■■□□□ 1
COLCA1Q6ZS62 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COLCA1Q6ZS62 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
COLCA1Q6ZS62 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.27■■□□□ 1
COLCA1Q6ZS62 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
COLCA1Q6ZS62 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.27■■□□□ 1
COLCA1Q6ZS62 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COLCA1Q6ZS62 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.27■■□□□ 1
COLCA1Q6ZS62 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.27■■□□□ 1
COLCA1Q6ZS62 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COLCA1Q6ZS62 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.26■□□□□ 0.99
COLCA1Q6ZS62 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
COLCA1Q6ZS62 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.26■□□□□ 0.99
COLCA1Q6ZS62 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COLCA1Q6ZS62 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
COLCA1Q6ZS62 MIR4449-201ENST00000578365 66 ntBASIC21.25■□□□□ 0.99
COLCA1Q6ZS62 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COLCA1Q6ZS62 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms