Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HIST2H2AA3Q6FI13 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HIST2H2AA3Q6FI13 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.84■■□□□ 1.41
HIST2H2AA3Q6FI13 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HIST2H2AA3Q6FI13 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.84■■□□□ 1.41
HIST2H2AA3Q6FI13 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HIST2H2AA3Q6FI13 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
HIST2H2AA3Q6FI13 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HIST2H2AA3Q6FI13 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HIST2H2AA3Q6FI13 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HIST2H2AA3Q6FI13 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HIST2H2AA3Q6FI13 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.83■■□□□ 1.41
HIST2H2AA3Q6FI13 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
HIST2H2AA3Q6FI13 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HIST2H2AA3Q6FI13 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
HIST2H2AA3Q6FI13 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
HIST2H2AA3Q6FI13 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
HIST2H2AA3Q6FI13 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.83■■□□□ 1.4
HIST2H2AA3Q6FI13 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
HIST2H2AA3Q6FI13 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.82■■□□□ 1.4
HIST2H2AA3Q6FI13 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HIST2H2AA3Q6FI13 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HIST2H2AA3Q6FI13 AP004609.3-201ENST00000610705 1884 ntBASIC23.81■■□□□ 1.4
HIST2H2AA3Q6FI13 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HIST2H2AA3Q6FI13 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HIST2H2AA3Q6FI13 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.81■■□□□ 1.4
HIST2H2AA3Q6FI13 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.81■■□□□ 1.4
HIST2H2AA3Q6FI13 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HIST2H2AA3Q6FI13 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HIST2H2AA3Q6FI13 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HIST2H2AA3Q6FI13 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HIST2H2AA3Q6FI13 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
HIST2H2AA3Q6FI13 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.79■■□□□ 1.4
HIST2H2AA3Q6FI13 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HIST2H2AA3Q6FI13 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.79■■□□□ 1.4
HIST2H2AA3Q6FI13 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
HIST2H2AA3Q6FI13 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.78■■□□□ 1.4
HIST2H2AA3Q6FI13 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
HIST2H2AA3Q6FI13 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
HIST2H2AA3Q6FI13 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HIST2H2AA3Q6FI13 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HIST2H2AA3Q6FI13 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
HIST2H2AA3Q6FI13 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HIST2H2AA3Q6FI13 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HIST2H2AA3Q6FI13 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.77■■□□□ 1.4
HIST2H2AA3Q6FI13 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.77■■□□□ 1.4
HIST2H2AA3Q6FI13 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.77■■□□□ 1.4
HIST2H2AA3Q6FI13 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HIST2H2AA3Q6FI13 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
HIST2H2AA3Q6FI13 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HIST2H2AA3Q6FI13 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.76■■□□□ 1.39
HIST2H2AA3Q6FI13 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HIST2H2AA3Q6FI13 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.76■■□□□ 1.39
HIST2H2AA3Q6FI13 AC142472.1-201ENST00000612013 1741 ntBASIC23.76■■□□□ 1.39
HIST2H2AA3Q6FI13 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HIST2H2AA3Q6FI13 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HIST2H2AA3Q6FI13 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HIST2H2AA3Q6FI13 AC126177.7-201ENST00000547904 679 ntBASIC23.75■■□□□ 1.39
HIST2H2AA3Q6FI13 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
HIST2H2AA3Q6FI13 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HIST2H2AA3Q6FI13 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
HIST2H2AA3Q6FI13 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
HIST2H2AA3Q6FI13 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HIST2H2AA3Q6FI13 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HIST2H2AA3Q6FI13 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.74■■□□□ 1.39
HIST2H2AA3Q6FI13 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HIST2H2AA3Q6FI13 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
HIST2H2AA3Q6FI13 AL359258.2-201ENST00000564063 1566 ntBASIC23.74■■□□□ 1.39
HIST2H2AA3Q6FI13 MIR639-201ENST00000384974 98 ntBASIC23.73■■□□□ 1.39
HIST2H2AA3Q6FI13 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
HIST2H2AA3Q6FI13 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.73■■□□□ 1.39
HIST2H2AA3Q6FI13 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HIST2H2AA3Q6FI13 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HIST2H2AA3Q6FI13 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.72■■□□□ 1.39
HIST2H2AA3Q6FI13 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HIST2H2AA3Q6FI13 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HIST2H2AA3Q6FI13 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HIST2H2AA3Q6FI13 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HIST2H2AA3Q6FI13 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.71■■□□□ 1.39
HIST2H2AA3Q6FI13 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
HIST2H2AA3Q6FI13 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
HIST2H2AA3Q6FI13 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HIST2H2AA3Q6FI13 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.7■■□□□ 1.38
HIST2H2AA3Q6FI13 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HIST2H2AA3Q6FI13 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HIST2H2AA3Q6FI13 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HIST2H2AA3Q6FI13 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HIST2H2AA3Q6FI13 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.69■■□□□ 1.38
HIST2H2AA3Q6FI13 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
HIST2H2AA3Q6FI13 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
HIST2H2AA3Q6FI13 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
HIST2H2AA3Q6FI13 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HIST2H2AA3Q6FI13 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.68■■□□□ 1.38
HIST2H2AA3Q6FI13 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HIST2H2AA3Q6FI13 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HIST2H2AA3Q6FI13 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HIST2H2AA3Q6FI13 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.67■■□□□ 1.38
HIST2H2AA3Q6FI13 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HIST2H2AA3Q6FI13 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HIST2H2AA3Q6FI13 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms