Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC32.27■■■□□ 2.76
KCNQ4P56696 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
KCNQ4P56696 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC32.26■■■□□ 2.75
KCNQ4P56696 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC32.26■■■□□ 2.75
KCNQ4P56696 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
KCNQ4P56696 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
KCNQ4P56696 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
KCNQ4P56696 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
KCNQ4P56696 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
KCNQ4P56696 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
KCNQ4P56696 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
KCNQ4P56696 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC32.24■■■□□ 2.75
KCNQ4P56696 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
KCNQ4P56696 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.24■■■□□ 2.75
KCNQ4P56696 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
KCNQ4P56696 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
KCNQ4P56696 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
KCNQ4P56696 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
KCNQ4P56696 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC32.23■■■□□ 2.75
KCNQ4P56696 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC32.23■■■□□ 2.75
KCNQ4P56696 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC32.23■■■□□ 2.75
KCNQ4P56696 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
KCNQ4P56696 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
KCNQ4P56696 AL356441.2-201ENST00000443009 864 ntBASIC32.21■■■□□ 2.75
KCNQ4P56696 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC32.21■■■□□ 2.75
KCNQ4P56696 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC32.21■■■□□ 2.75
KCNQ4P56696 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC32.21■■■□□ 2.75
KCNQ4P56696 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
KCNQ4P56696 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
KCNQ4P56696 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
KCNQ4P56696 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC32.2■■■□□ 2.75
KCNQ4P56696 AC103724.3-201ENST00000564481 992 ntBASIC32.2■■■□□ 2.75
KCNQ4P56696 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
KCNQ4P56696 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
KCNQ4P56696 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
KCNQ4P56696 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC32.19■■■□□ 2.74
KCNQ4P56696 PRTG-204ENST00000561292 833 ntTSL 3 BASIC32.19■■■□□ 2.74
KCNQ4P56696 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
KCNQ4P56696 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC32.18■■■□□ 2.74
KCNQ4P56696 MIR935-201ENST00000401179 91 ntBASIC32.18■■■□□ 2.74
KCNQ4P56696 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
KCNQ4P56696 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
KCNQ4P56696 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
KCNQ4P56696 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC32.17■■■□□ 2.74
KCNQ4P56696 MIR4508-201ENST00000584178 70 ntBASIC32.17■■■□□ 2.74
KCNQ4P56696 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC32.17■■■□□ 2.74
KCNQ4P56696 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.17■■■□□ 2.74
KCNQ4P56696 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.16■■■□□ 2.74
KCNQ4P56696 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
KCNQ4P56696 AC018755.3-202ENST00000596210 929 ntBASIC32.16■■■□□ 2.74
KCNQ4P56696 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.16■■■□□ 2.74
KCNQ4P56696 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC32.16■■■□□ 2.74
KCNQ4P56696 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
KCNQ4P56696 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
KCNQ4P56696 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.14■■■□□ 2.74
KCNQ4P56696 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
KCNQ4P56696 PFN2-211ENST00000489155 636 ntTSL 4 BASIC32.14■■■□□ 2.74
KCNQ4P56696 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC32.13■■■□□ 2.73
KCNQ4P56696 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC32.13■■■□□ 2.73
KCNQ4P56696 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC32.13■■■□□ 2.73
KCNQ4P56696 HYI-210ENST00000486909 905 ntTSL 5 BASIC32.12■■■□□ 2.73
KCNQ4P56696 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
KCNQ4P56696 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC32.12■■■□□ 2.73
KCNQ4P56696 MIR3960-201ENST00000583311 91 ntBASIC32.12■■■□□ 2.73
KCNQ4P56696 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC32.12■■■□□ 2.73
KCNQ4P56696 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
KCNQ4P56696 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
KCNQ4P56696 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
KCNQ4P56696 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
KCNQ4P56696 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC32.11■■■□□ 2.73
KCNQ4P56696 IDNK-201ENST00000376417 511 ntTSL 5 BASIC32.11■■■□□ 2.73
KCNQ4P56696 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
KCNQ4P56696 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
KCNQ4P56696 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
KCNQ4P56696 AL031848.2-201ENST00000607670 837 ntBASIC32.1■■■□□ 2.73
KCNQ4P56696 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
KCNQ4P56696 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC32.09■■■□□ 2.73
KCNQ4P56696 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC32.09■■■□□ 2.73
KCNQ4P56696 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC32.07■■■□□ 2.72
KCNQ4P56696 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC32.07■■■□□ 2.72
KCNQ4P56696 AP004833.2-201ENST00000532228 1454 ntBASIC32.07■■■□□ 2.72
KCNQ4P56696 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC32.07■■■□□ 2.72
KCNQ4P56696 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
KCNQ4P56696 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
KCNQ4P56696 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
KCNQ4P56696 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
KCNQ4P56696 ST7-AS1-201ENST00000456775 1889 ntBASIC32.06■■■□□ 2.72
KCNQ4P56696 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
KCNQ4P56696 AC239859.2-201ENST00000444165 318 ntBASIC32.04■■■□□ 2.72
KCNQ4P56696 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
KCNQ4P56696 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
KCNQ4P56696 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC32.03■■■□□ 2.72
KCNQ4P56696 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.03■■■□□ 2.72
KCNQ4P56696 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
KCNQ4P56696 IDNK-203ENST00000405990 629 ntTSL 2 BASIC32.02■■■□□ 2.72
KCNQ4P56696 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
KCNQ4P56696 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC32.02■■■□□ 2.72
KCNQ4P56696 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
KCNQ4P56696 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.01■■■□□ 2.72
KCNQ4P56696 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms