Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A9P48067 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SLC6A9P48067 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC6A9P48067 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A9P48067 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SLC6A9P48067 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A9P48067 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A9P48067 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.68■■□□□ 1.06
SLC6A9P48067 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A9P48067 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC6A9P48067 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC6A9P48067 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A9P48067 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC6A9P48067 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC6A9P48067 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A9P48067 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SLC6A9P48067 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A9P48067 AL449106.1-201ENST00000608517 1980 ntBASIC21.67■■□□□ 1.06
SLC6A9P48067 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SLC6A9P48067 HLA-V-202ENST00000446817 847 ntBASIC21.66■■□□□ 1.06
SLC6A9P48067 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A9P48067 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A9P48067 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A9P48067 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A9P48067 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.65■■□□□ 1.06
SLC6A9P48067 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC6A9P48067 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC6A9P48067 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A9P48067 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A9P48067 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC6A9P48067 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SLC6A9P48067 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC6A9P48067 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC6A9P48067 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.64■■□□□ 1.05
SLC6A9P48067 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC6A9P48067 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SLC6A9P48067 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A9P48067 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC6A9P48067 AC008813.1-201ENST00000536597 885 ntBASIC21.63■■□□□ 1.05
SLC6A9P48067 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC6A9P48067 WHAMMP3-201ENST00000611636 1609 ntBASIC21.62■■□□□ 1.05
SLC6A9P48067 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A9P48067 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.62■■□□□ 1.05
SLC6A9P48067 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC6A9P48067 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A9P48067 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A9P48067 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A9P48067 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A9P48067 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A9P48067 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC6A9P48067 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A9P48067 AP004609.3-201ENST00000610705 1884 ntBASIC21.61■■□□□ 1.05
SLC6A9P48067 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A9P48067 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC6A9P48067 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A9P48067 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A9P48067 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SLC6A9P48067 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A9P48067 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC6A9P48067 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A9P48067 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A9P48067 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A9P48067 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
SLC6A9P48067 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A9P48067 MIR3648-2-201ENST00000581792 180 ntBASIC21.59■■□□□ 1.05
SLC6A9P48067 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A9P48067 MIR3648-1-201ENST00000615959 180 ntBASIC21.59■■□□□ 1.05
SLC6A9P48067 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A9P48067 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SLC6A9P48067 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SLC6A9P48067 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A9P48067 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.58■■□□□ 1.05
SLC6A9P48067 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SLC6A9P48067 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SLC6A9P48067 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A9P48067 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SLC6A9P48067 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC6A9P48067 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC6A9P48067 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SLC6A9P48067 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.56■■□□□ 1.04
SLC6A9P48067 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A9P48067 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A9P48067 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A9P48067 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A9P48067 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SLC6A9P48067 AC016575.1-201ENST00000607026 382 ntBASIC21.55■■□□□ 1.04
SLC6A9P48067 CR559946.2-201ENST00000623684 991 ntBASIC21.55■■□□□ 1.04
SLC6A9P48067 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC6A9P48067 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SLC6A9P48067 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC6A9P48067 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A9P48067 MIR219A2-201ENST00000608502 1504 ntBASIC21.55■■□□□ 1.04
SLC6A9P48067 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A9P48067 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC6A9P48067 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC6A9P48067 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A9P48067 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A9P48067 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC6A9P48067 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A9P48067 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms