Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A9P48067 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SLC6A9P48067 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC6A9P48067 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A9P48067 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SLC6A9P48067 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A9P48067 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A9P48067 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.68■■□□□ 1.06
SLC6A9P48067 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A9P48067 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC6A9P48067 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC6A9P48067 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A9P48067 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC6A9P48067 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC6A9P48067 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A9P48067 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SLC6A9P48067 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A9P48067 AL449106.1-201ENST00000608517 1980 ntBASIC21.67■■□□□ 1.06
SLC6A9P48067 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SLC6A9P48067 HLA-V-202ENST00000446817 847 ntBASIC21.66■■□□□ 1.06
SLC6A9P48067 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A9P48067 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A9P48067 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A9P48067 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A9P48067 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.65■■□□□ 1.06
SLC6A9P48067 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC6A9P48067 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC6A9P48067 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A9P48067 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A9P48067 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC6A9P48067 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SLC6A9P48067 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC6A9P48067 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC6A9P48067 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.64■■□□□ 1.05
SLC6A9P48067 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC6A9P48067 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SLC6A9P48067 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC6A9P48067 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC6A9P48067 AC008813.1-201ENST00000536597 885 ntBASIC21.63■■□□□ 1.05
SLC6A9P48067 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC6A9P48067 WHAMMP3-201ENST00000611636 1609 ntBASIC21.62■■□□□ 1.05
SLC6A9P48067 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A9P48067 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.62■■□□□ 1.05
SLC6A9P48067 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC6A9P48067 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A9P48067 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A9P48067 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC6A9P48067 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A9P48067 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A9P48067 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC6A9P48067 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A9P48067 AP004609.3-201ENST00000610705 1884 ntBASIC21.61■■□□□ 1.05
SLC6A9P48067 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A9P48067 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC6A9P48067 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A9P48067 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A9P48067 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SLC6A9P48067 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A9P48067 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC6A9P48067 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A9P48067 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A9P48067 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A9P48067 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
SLC6A9P48067 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A9P48067 MIR3648-2-201ENST00000581792 180 ntBASIC21.59■■□□□ 1.05
SLC6A9P48067 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A9P48067 MIR3648-1-201ENST00000615959 180 ntBASIC21.59■■□□□ 1.05
SLC6A9P48067 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A9P48067 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SLC6A9P48067 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SLC6A9P48067 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A9P48067 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.58■■□□□ 1.05
SLC6A9P48067 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SLC6A9P48067 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SLC6A9P48067 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A9P48067 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SLC6A9P48067 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC6A9P48067 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC6A9P48067 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SLC6A9P48067 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.56■■□□□ 1.04
SLC6A9P48067 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A9P48067 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A9P48067 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A9P48067 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A9P48067 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SLC6A9P48067 AC016575.1-201ENST00000607026 382 ntBASIC21.55■■□□□ 1.04
SLC6A9P48067 CR559946.2-201ENST00000623684 991 ntBASIC21.55■■□□□ 1.04
SLC6A9P48067 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC6A9P48067 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SLC6A9P48067 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC6A9P48067 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A9P48067 MIR219A2-201ENST00000608502 1504 ntBASIC21.55■■□□□ 1.04
SLC6A9P48067 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A9P48067 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC6A9P48067 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC6A9P48067 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A9P48067 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A9P48067 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC6A9P48067 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A9P48067 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 264.3 ms