Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
SOX11P35716 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.89■■□□□ 1.42
SOX11P35716 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.89■■□□□ 1.41
SOX11P35716 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SOX11P35716 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SOX11P35716 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.88■■□□□ 1.41
SOX11P35716 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SOX11P35716 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.88■■□□□ 1.41
SOX11P35716 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.88■■□□□ 1.41
SOX11P35716 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SOX11P35716 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SOX11P35716 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SOX11P35716 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.87■■□□□ 1.41
SOX11P35716 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SOX11P35716 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SOX11P35716 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.86■■□□□ 1.41
SOX11P35716 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SOX11P35716 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
SOX11P35716 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SOX11P35716 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.85■■□□□ 1.41
SOX11P35716 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SOX11P35716 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SOX11P35716 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SOX11P35716 AC135983.2-203ENST00000454486 1613 ntBASIC23.84■■□□□ 1.41
SOX11P35716 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.84■■□□□ 1.41
SOX11P35716 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
SOX11P35716 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.83■■□□□ 1.41
SOX11P35716 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.83■■□□□ 1.41
SOX11P35716 AP002414.2-202ENST00000590929 1450 ntBASIC23.83■■□□□ 1.41
SOX11P35716 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
SOX11P35716 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.83■■□□□ 1.4
SOX11P35716 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SOX11P35716 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SOX11P35716 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SOX11P35716 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.82■■□□□ 1.4
SOX11P35716 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOX11P35716 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOX11P35716 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SOX11P35716 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SOX11P35716 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SOX11P35716 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SOX11P35716 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SOX11P35716 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOX11P35716 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.81■■□□□ 1.4
SOX11P35716 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOX11P35716 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SOX11P35716 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SOX11P35716 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SOX11P35716 WHAMMP2-203ENST00000563942 1603 ntBASIC23.81■■□□□ 1.4
SOX11P35716 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.8■■□□□ 1.4
SOX11P35716 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SOX11P35716 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
SOX11P35716 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.8■■□□□ 1.4
SOX11P35716 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SOX11P35716 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SOX11P35716 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.8■■□□□ 1.4
SOX11P35716 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SOX11P35716 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.79■■□□□ 1.4
SOX11P35716 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SOX11P35716 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.79■■□□□ 1.4
SOX11P35716 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.79■■□□□ 1.4
SOX11P35716 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SOX11P35716 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SOX11P35716 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.78■■□□□ 1.4
SOX11P35716 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
SOX11P35716 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SOX11P35716 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SOX11P35716 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SOX11P35716 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.77■■□□□ 1.4
SOX11P35716 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
SOX11P35716 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.77■■□□□ 1.4
SOX11P35716 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SOX11P35716 AC091060.1-201ENST00000623524 1766 ntBASIC23.77■■□□□ 1.4
SOX11P35716 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SOX11P35716 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.77■■□□□ 1.4
SOX11P35716 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.77■■□□□ 1.4
SOX11P35716 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.77■■□□□ 1.4
SOX11P35716 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SOX11P35716 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SOX11P35716 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SOX11P35716 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
SOX11P35716 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.76■■□□□ 1.39
SOX11P35716 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SOX11P35716 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SOX11P35716 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SOX11P35716 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SOX11P35716 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SOX11P35716 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SOX11P35716 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.74■■□□□ 1.39
SOX11P35716 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
SOX11P35716 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SOX11P35716 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SOX11P35716 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SOX11P35716 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SOX11P35716 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
SOX11P35716 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.73■■□□□ 1.39
SOX11P35716 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SOX11P35716 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SOX11P35716 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SOX11P35716 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms