Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
SOX18P35713 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.21■■□□□ 1.31
SOX18P35713 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SOX18P35713 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX18P35713 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SOX18P35713 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX18P35713 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SOX18P35713 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX18P35713 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SOX18P35713 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SOX18P35713 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.19■■□□□ 1.3
SOX18P35713 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX18P35713 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.19■■□□□ 1.3
SOX18P35713 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX18P35713 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX18P35713 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SOX18P35713 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SOX18P35713 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SOX18P35713 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SOX18P35713 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SOX18P35713 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SOX18P35713 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SOX18P35713 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX18P35713 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX18P35713 MIR4449-201ENST00000578365 66 ntBASIC23.17■■□□□ 1.3
SOX18P35713 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX18P35713 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX18P35713 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.17■■□□□ 1.3
SOX18P35713 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX18P35713 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SOX18P35713 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SOX18P35713 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.16■■□□□ 1.3
SOX18P35713 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SOX18P35713 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.16■■□□□ 1.3
SOX18P35713 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SOX18P35713 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.16■■□□□ 1.3
SOX18P35713 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.15■■□□□ 1.3
SOX18P35713 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SOX18P35713 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.15■■□□□ 1.3
SOX18P35713 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SOX18P35713 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SOX18P35713 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SOX18P35713 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.14■■□□□ 1.29
SOX18P35713 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SOX18P35713 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SOX18P35713 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SOX18P35713 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.13■■□□□ 1.29
SOX18P35713 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SOX18P35713 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SOX18P35713 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.12■■□□□ 1.29
SOX18P35713 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.12■■□□□ 1.29
SOX18P35713 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SOX18P35713 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.11■■□□□ 1.29
SOX18P35713 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SOX18P35713 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SOX18P35713 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SOX18P35713 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SOX18P35713 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SOX18P35713 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SOX18P35713 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SOX18P35713 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SOX18P35713 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SOX18P35713 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SOX18P35713 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SOX18P35713 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.1■■□□□ 1.29
SOX18P35713 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.1■■□□□ 1.29
SOX18P35713 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SOX18P35713 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.1■■□□□ 1.29
SOX18P35713 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.09■■□□□ 1.29
SOX18P35713 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SOX18P35713 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SOX18P35713 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SOX18P35713 AL359258.2-201ENST00000564063 1566 ntBASIC23.09■■□□□ 1.29
SOX18P35713 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SOX18P35713 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SOX18P35713 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SOX18P35713 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.28
SOX18P35713 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.08■■□□□ 1.28
SOX18P35713 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SOX18P35713 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SOX18P35713 AP004609.3-201ENST00000610705 1884 ntBASIC23.07■■□□□ 1.28
SOX18P35713 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SOX18P35713 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.07■■□□□ 1.28
SOX18P35713 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SOX18P35713 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SOX18P35713 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SOX18P35713 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SOX18P35713 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SOX18P35713 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SOX18P35713 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SOX18P35713 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.05■■□□□ 1.28
SOX18P35713 AC142472.1-201ENST00000612013 1741 ntBASIC23.05■■□□□ 1.28
SOX18P35713 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.05■■□□□ 1.28
SOX18P35713 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SOX18P35713 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SOX18P35713 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SOX18P35713 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SOX18P35713 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SOX18P35713 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.04■■□□□ 1.28
SOX18P35713 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms