Protein–RNA interactions for Protein: P32842

VMA11, V-type proton ATPase subunit c', yeast

Predictions only

Length 164 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	P32842	NTG2	YOL043C	1143 nt		5.65	□□□□□ -1.5
VMA11	P32842	YIL029W-A	YIL029W-A	372 nt		5.64	□□□□□ -1.51
VMA11	P32842	HMS2	YJR147W	1077 nt		5.64	□□□□□ -1.51
VMA11	P32842	YOL099C	YOL099C	492 nt		5.64	□□□□□ -1.51
VMA11	P32842	PRB1	YEL060C	1908 nt		5.64	□□□□□ -1.51
VMA11	P32842	GNA1	YFL017C	480 nt		5.63	□□□□□ -1.51
VMA11	P32842	YKL153W	YKL153W	510 nt		5.63	□□□□□ -1.51
VMA11	P32842	SCS22	YBL091C-A	528 nt		5.63	□□□□□ -1.51
VMA11	P32842	CRH1	YGR189C	1524 nt		5.63	□□□□□ -1.51
VMA11	P32842	DAL4	YIR028W	1908 nt		5.62	□□□□□ -1.51
VMA11	P32842	YLR184W	YLR184W	348 nt		5.62	□□□□□ -1.51
VMA11	P32842	LIP5	YOR196C	1245 nt		5.62	□□□□□ -1.51
VMA11	P32842	RFS1	YBR052C	633 nt		5.62	□□□□□ -1.51
VMA11	P32842	YPL136W	YPL136W	369 nt		5.62	□□□□□ -1.51
VMA11	P32842	CIR2	YOR356W	1896 nt		5.62	□□□□□ -1.51
VMA11	P32842	YCR049C	YCR049C	447 nt		5.61	□□□□□ -1.51
VMA11	P32842	YEN1	YER041W	2280 nt		5.61	□□□□□ -1.51
VMA11	P32842	LCL3	YGL085W	825 nt		5.61	□□□□□ -1.51
VMA11	P32842	NUP49	YGL172W	1419 nt		5.61	□□□□□ -1.51
VMA11	P32842	RPL2B	YIL018W	765 nt		5.61	□□□□□ -1.51
VMA11	P32842	YAL045C	YAL045C	309 nt		5.61	□□□□□ -1.51
VMA11	P32842	MRPL19	YNL185C	477 nt		5.61	□□□□□ -1.51
VMA11	P32842	SKY1	YMR216C	2229 nt		5.6	□□□□□ -1.51
VMA11	P32842	YLL058W	YLL058W	1728 nt		5.6	□□□□□ -1.51
VMA11	P32842	TOD6	YBL054W	1578 nt		5.6	□□□□□ -1.51
VMA11	P32842	SRF1	YDL133W	1314 nt		5.6	□□□□□ -1.51
VMA11	P32842	MSS51	YLR203C	1311 nt		5.6	□□□□□ -1.51
VMA11	P32842	QCR6	YFR033C	444 nt		5.6	□□□□□ -1.51
VMA11	P32842	ASF1	YJL115W	840 nt		5.6	□□□□□ -1.51
VMA11	P32842	MHP1	YJL042W	4197 nt		5.59	□□□□□ -1.51
VMA11	P32842	BIM1	YER016W	1035 nt		5.59	□□□□□ -1.51
VMA11	P32842	YLR030W	YLR030W	792 nt		5.59	□□□□□ -1.51
VMA11	P32842	ILV6	YCL009C	930 nt		5.59	□□□□□ -1.51
VMA11	P32842	PAB1	YER165W	1734 nt		5.59	□□□□□ -1.51
VMA11	P32842	MLS1	YNL117W	1665 nt		5.59	□□□□□ -1.52
VMA11	P32842	YHR131C	YHR131C	2553 nt		5.59	□□□□□ -1.52
VMA11	P32842	SAL1	YNL083W	1485 nt		5.58	□□□□□ -1.52
VMA11	P32842	RBS1	YDL189W	1374 nt		5.58	□□□□□ -1.52
VMA11	P32842	IMG1	YCR046C	510 nt		5.58	□□□□□ -1.52
VMA11	P32842	FMO1	YHR176W	1299 nt		5.58	□□□□□ -1.52
VMA11	P32842	MDH1	YKL085W	1005 nt		5.58	□□□□□ -1.52
VMA11	P32842	YLL056C	YLL056C	897 nt		5.58	□□□□□ -1.52
VMA11	P32842	YOR041C	YOR041C	432 nt		5.58	□□□□□ -1.52
VMA11	P32842	LSC1	YOR142W	990 nt		5.58	□□□□□ -1.52
VMA11	P32842	CLN1	YMR199W	1641 nt		5.58	□□□□□ -1.52
VMA11	P32842	YGL102C	YGL102C	429 nt		5.57	□□□□□ -1.52
VMA11	P32842	TAF9	YMR236W	474 nt		5.57	□□□□□ -1.52
VMA11	P32842	MRPS18	YNL306W	654 nt		5.57	□□□□□ -1.52
VMA11	P32842	ICP55	YER078C	1536 nt		5.57	□□□□□ -1.52
VMA11	P32842	VMA2	YBR127C	1554 nt		5.56	□□□□□ -1.52
VMA11	P32842	GTS1	YGL181W	1191 nt		5.56	□□□□□ -1.52
VMA11	P32842	THR1	YHR025W	1074 nt		5.56	□□□□□ -1.52
VMA11	P32842	YHR218W-A	YHR218W-A	318 nt		5.56	□□□□□ -1.52
VMA11	P32842	YBL112C	YBL112C	318 nt		5.56	□□□□□ -1.52
VMA11	P32842	PHO85	YPL031C	918 nt		5.56	□□□□□ -1.52
VMA11	P32842	YBR113W	YBR113W	483 nt		5.56	□□□□□ -1.52
VMA11	P32842	MSC3	YLR219W	2187 nt		5.56	□□□□□ -1.52
VMA11	P32842	SEC24	YIL109C	2781 nt		5.55	□□□□□ -1.52
VMA11	P32842	MAL31	YBR298C	1845 nt		5.55	□□□□□ -1.52
VMA11	P32842	PRI1	YIR008C	1230 nt		5.55	□□□□□ -1.52
VMA11	P32842	NOG2	YNR053C	1461 nt		5.55	□□□□□ -1.52
VMA11	P32842	CDC23	YHR166C	1881 nt		5.55	□□□□□ -1.52
VMA11	P32842	CBK1	YNL161W	2271 nt		5.55	□□□□□ -1.52
VMA11	P32842	RSP5	YER125W	2430 nt		5.54	□□□□□ -1.52
VMA11	P32842	HPT1	YDR399W	666 nt		5.54	□□□□□ -1.52
VMA11	P32842	GCG1	YER163C	699 nt		5.54	□□□□□ -1.52
VMA11	P32842	RQC1	YDR333C	2172 nt		5.54	□□□□□ -1.52
VMA11	P32842	CTA1	YDR256C	1548 nt		5.53	□□□□□ -1.52
VMA11	P32842	TKL2	YBR117C	2046 nt		5.53	□□□□□ -1.52
VMA11	P32842	REC107	YJR021C	945 nt		5.53	□□□□□ -1.52
VMA11	P32842	YPR127W	YPR127W	1038 nt		5.53	□□□□□ -1.52
VMA11	P32842	PTC7	YHR076W	1032 nt		5.52	□□□□□ -1.53
VMA11	P32842	DRE2	YKR071C	1047 nt		5.52	□□□□□ -1.53
VMA11	P32842	IMD1	YAR073W	1212 nt		5.52	□□□□□ -1.53
VMA11	P32842	YMR252C	YMR252C	405 nt		5.52	□□□□□ -1.53
VMA11	P32842	SMX3	YPR182W	261 nt		5.52	□□□□□ -1.53
VMA11	P32842	MRPS28	YDR337W	861 nt		5.51	□□□□□ -1.53
VMA11	P32842	SPG5	YMR191W	1122 nt		5.51	□□□□□ -1.53
VMA11	P32842	FLC2	YAL053W	2352 nt		5.51	□□□□□ -1.53
VMA11	P32842	ERP2	YAL007C	648 nt		5.5	□□□□□ -1.53
VMA11	P32842	RRN10	YBL025W	438 nt		5.5	□□□□□ -1.53
VMA11	P32842	EXG2	YDR261C	1689 nt		5.5	□□□□□ -1.53
VMA11	P32842	NUP57	YGR119C	1626 nt		5.49	□□□□□ -1.53
VMA11	P32842	FYV1	YDR024W	486 nt		5.49	□□□□□ -1.53
VMA11	P32842	YLR361C-A	YLR361C-A	297 nt		5.49	□□□□□ -1.53
VMA11	P32842	ERG8	YMR220W	1356 nt		5.49	□□□□□ -1.53
VMA11	P32842	MSG5	YNL053W	1470 nt		5.48	□□□□□ -1.53
VMA11	P32842	OM45	YIL136W	1182 nt		5.48	□□□□□ -1.53
VMA11	P32842	RNH1	YMR234W	1047 nt		5.48	□□□□□ -1.53
VMA11	P32842	HXT2	YMR011W	1626 nt		5.48	□□□□□ -1.53
VMA11	P32842	DLD1	YDL174C	1764 nt		5.47	□□□□□ -1.53
VMA11	P32842	CAN1	YEL063C	1773 nt		5.47	□□□□□ -1.53
VMA11	P32842	GTT3	YEL017W	1014 nt		5.47	□□□□□ -1.53
VMA11	P32842	YKL018C-A	YKL018C-A	300 nt		5.47	□□□□□ -1.53
VMA11	P32842	YKL077W	YKL077W	1179 nt		5.47	□□□□□ -1.53
VMA11	P32842	YKL102C	YKL102C	306 nt		5.47	□□□□□ -1.53
VMA11	P32842	SWD1	YAR003W	1281 nt		5.47	□□□□□ -1.53
VMA11	P32842	FCY2	YER056C	1602 nt		5.47	□□□□□ -1.53
VMA11	P32842	RMD8	YFR048W	1989 nt		5.47	□□□□□ -1.53
VMA11	P32842	HIS1	YER055C	894 nt		5.46	□□□□□ -1.54

Retrieved 100 of 7,029 protein–RNA pairs in 79.2 ms