Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD3DP04234 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD3DP04234 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CD3DP04234 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD3DP04234 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD3DP04234 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.87■□□□□ 0.93
CD3DP04234 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD3DP04234 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD3DP04234 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD3DP04234 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD3DP04234 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD3DP04234 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CD3DP04234 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD3DP04234 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD3DP04234 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD3DP04234 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD3DP04234 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD3DP04234 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.85■□□□□ 0.93
CD3DP04234 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD3DP04234 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD3DP04234 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD3DP04234 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CD3DP04234 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.84■□□□□ 0.93
CD3DP04234 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD3DP04234 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.84■□□□□ 0.93
CD3DP04234 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CD3DP04234 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.84■□□□□ 0.93
CD3DP04234 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.84■□□□□ 0.93
CD3DP04234 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD3DP04234 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CD3DP04234 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD3DP04234 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD3DP04234 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.83■□□□□ 0.93
CD3DP04234 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CD3DP04234 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD3DP04234 AC142472.1-201ENST00000612013 1741 ntBASIC20.82■□□□□ 0.92
CD3DP04234 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD3DP04234 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD3DP04234 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.81■□□□□ 0.92
CD3DP04234 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD3DP04234 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD3DP04234 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD3DP04234 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD3DP04234 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD3DP04234 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD3DP04234 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CD3DP04234 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD3DP04234 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD3DP04234 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD3DP04234 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD3DP04234 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD3DP04234 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD3DP04234 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD3DP04234 CAHM-201ENST00000604200 896 ntBASIC20.8■□□□□ 0.92
CD3DP04234 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.8■□□□□ 0.92
CD3DP04234 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD3DP04234 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.8■□□□□ 0.92
CD3DP04234 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD3DP04234 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CD3DP04234 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CD3DP04234 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD3DP04234 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.79■□□□□ 0.92
CD3DP04234 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CD3DP04234 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD3DP04234 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CD3DP04234 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CD3DP04234 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CD3DP04234 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD3DP04234 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD3DP04234 AC142381.3-201ENST00000568208 1670 ntBASIC20.77■□□□□ 0.92
CD3DP04234 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CD3DP04234 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD3DP04234 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD3DP04234 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CD3DP04234 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.77■□□□□ 0.92
CD3DP04234 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CD3DP04234 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CD3DP04234 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CD3DP04234 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD3DP04234 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CD3DP04234 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD3DP04234 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.76■□□□□ 0.91
CD3DP04234 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD3DP04234 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD3DP04234 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD3DP04234 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD3DP04234 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.75■□□□□ 0.91
CD3DP04234 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.75■□□□□ 0.91
CD3DP04234 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.75■□□□□ 0.91
CD3DP04234 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CD3DP04234 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD3DP04234 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.75■□□□□ 0.91
CD3DP04234 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CD3DP04234 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.75■□□□□ 0.91
CD3DP04234 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD3DP04234 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD3DP04234 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD3DP04234 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CD3DP04234 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD3DP04234 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms