Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV3P03979 WHAMMP3-201ENST00000611636 1609 ntBASIC19.4■□□□□ 0.7
TRGV3P03979 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRGV3P03979 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.39■□□□□ 0.69
TRGV3P03979 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRGV3P03979 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRGV3P03979 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRGV3P03979 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV3P03979 AL359258.2-201ENST00000564063 1566 ntBASIC19.38■□□□□ 0.69
TRGV3P03979 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRGV3P03979 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TRGV3P03979 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRGV3P03979 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRGV3P03979 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRGV3P03979 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRGV3P03979 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRGV3P03979 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.36■□□□□ 0.69
TRGV3P03979 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRGV3P03979 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRGV3P03979 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.36■□□□□ 0.69
TRGV3P03979 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.36■□□□□ 0.69
TRGV3P03979 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRGV3P03979 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRGV3P03979 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRGV3P03979 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.35■□□□□ 0.69
TRGV3P03979 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRGV3P03979 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.35■□□□□ 0.69
TRGV3P03979 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.35■□□□□ 0.69
TRGV3P03979 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TRGV3P03979 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRGV3P03979 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRGV3P03979 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.34■□□□□ 0.69
TRGV3P03979 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.34■□□□□ 0.69
TRGV3P03979 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRGV3P03979 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.34■□□□□ 0.69
TRGV3P03979 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
TRGV3P03979 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRGV3P03979 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRGV3P03979 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRGV3P03979 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRGV3P03979 AL449106.1-201ENST00000608517 1980 ntBASIC19.33■□□□□ 0.68
TRGV3P03979 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRGV3P03979 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.32■□□□□ 0.68
TRGV3P03979 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRGV3P03979 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRGV3P03979 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRGV3P03979 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRGV3P03979 AC022413.1-201ENST00000624602 984 ntBASIC19.32■□□□□ 0.68
TRGV3P03979 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRGV3P03979 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRGV3P03979 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRGV3P03979 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRGV3P03979 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.31■□□□□ 0.68
TRGV3P03979 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRGV3P03979 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRGV3P03979 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRGV3P03979 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.3■□□□□ 0.68
TRGV3P03979 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TRGV3P03979 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.3■□□□□ 0.68
TRGV3P03979 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.3■□□□□ 0.68
TRGV3P03979 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRGV3P03979 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRGV3P03979 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRGV3P03979 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRGV3P03979 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRGV3P03979 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRGV3P03979 AC060814.1-201ENST00000554326 538 ntBASIC19.29■□□□□ 0.68
TRGV3P03979 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRGV3P03979 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRGV3P03979 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRGV3P03979 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRGV3P03979 GPX1-201ENST00000419349 1106 ntBASIC19.28■□□□□ 0.68
TRGV3P03979 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.28■□□□□ 0.68
TRGV3P03979 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRGV3P03979 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.28■□□□□ 0.68
TRGV3P03979 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRGV3P03979 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRGV3P03979 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TRGV3P03979 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.27■□□□□ 0.68
TRGV3P03979 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRGV3P03979 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.27■□□□□ 0.67
TRGV3P03979 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.27■□□□□ 0.67
TRGV3P03979 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRGV3P03979 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
TRGV3P03979 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.26■□□□□ 0.67
TRGV3P03979 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRGV3P03979 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRGV3P03979 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRGV3P03979 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRGV3P03979 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRGV3P03979 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRGV3P03979 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRGV3P03979 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRGV3P03979 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRGV3P03979 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.25■□□□□ 0.67
TRGV3P03979 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRGV3P03979 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRGV3P03979 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.25■□□□□ 0.67
TRGV3P03979 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRGV3P03979 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms