Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.03■■□□□ 1.6
MT-ND3P03897 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
MT-ND3P03897 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.02■■□□□ 1.6
MT-ND3P03897 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
MT-ND3P03897 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.02■■□□□ 1.6
MT-ND3P03897 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
MT-ND3P03897 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.01■■□□□ 1.59
MT-ND3P03897 DUX4L11-201ENST00000611504 1267 ntBASIC25.01■■□□□ 1.59
MT-ND3P03897 DUX4L12-201ENST00000614593 1267 ntBASIC25.01■■□□□ 1.59
MT-ND3P03897 DUX4L14-201ENST00000621227 1267 ntBASIC25.01■■□□□ 1.59
MT-ND3P03897 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
MT-ND3P03897 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
MT-ND3P03897 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.01■■□□□ 1.59
MT-ND3P03897 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
MT-ND3P03897 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
MT-ND3P03897 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25■■□□□ 1.59
MT-ND3P03897 MIR3648-2-201ENST00000581792 180 ntBASIC25■■□□□ 1.59
MT-ND3P03897 MIR3648-1-201ENST00000615959 180 ntBASIC25■■□□□ 1.59
MT-ND3P03897 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
MT-ND3P03897 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25■■□□□ 1.59
MT-ND3P03897 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
MT-ND3P03897 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
MT-ND3P03897 MIR4449-201ENST00000578365 66 ntBASIC24.99■■□□□ 1.59
MT-ND3P03897 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.99■■□□□ 1.59
MT-ND3P03897 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
MT-ND3P03897 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
MT-ND3P03897 LINC00273-201ENST00000539813 1452 ntBASIC24.98■■□□□ 1.59
MT-ND3P03897 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.98■■□□□ 1.59
MT-ND3P03897 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MT-ND3P03897 AC020928.2-201ENST00000588717 2197 ntBASIC24.97■■□□□ 1.59
MT-ND3P03897 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
MT-ND3P03897 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MT-ND3P03897 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.96■■□□□ 1.59
MT-ND3P03897 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
MT-ND3P03897 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.96■■□□□ 1.59
MT-ND3P03897 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
MT-ND3P03897 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MT-ND3P03897 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
MT-ND3P03897 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.95■■□□□ 1.58
MT-ND3P03897 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
MT-ND3P03897 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.95■■□□□ 1.58
MT-ND3P03897 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
MT-ND3P03897 AC016575.1-201ENST00000607026 382 ntBASIC24.95■■□□□ 1.58
MT-ND3P03897 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
MT-ND3P03897 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
MT-ND3P03897 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.94■■□□□ 1.58
MT-ND3P03897 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
MT-ND3P03897 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.93■■□□□ 1.58
MT-ND3P03897 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
MT-ND3P03897 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
MT-ND3P03897 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.92■■□□□ 1.58
MT-ND3P03897 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
MT-ND3P03897 AC092803.2-201ENST00000564287 1899 ntBASIC24.92■■□□□ 1.58
MT-ND3P03897 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
MT-ND3P03897 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.91■■□□□ 1.58
MT-ND3P03897 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
MT-ND3P03897 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.91■■□□□ 1.58
MT-ND3P03897 AP004609.3-201ENST00000610705 1884 ntBASIC24.91■■□□□ 1.58
MT-ND3P03897 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
MT-ND3P03897 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
MT-ND3P03897 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
MT-ND3P03897 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
MT-ND3P03897 DUSP8P4-201ENST00000399538 1761 ntBASIC24.9■■□□□ 1.58
MT-ND3P03897 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
MT-ND3P03897 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.89■■□□□ 1.58
MT-ND3P03897 CR559946.2-201ENST00000623684 991 ntBASIC24.89■■□□□ 1.58
MT-ND3P03897 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
MT-ND3P03897 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
MT-ND3P03897 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.89■■□□□ 1.57
MT-ND3P03897 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
MT-ND3P03897 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
MT-ND3P03897 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
MT-ND3P03897 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
MT-ND3P03897 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
MT-ND3P03897 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
MT-ND3P03897 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
MT-ND3P03897 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.87■■□□□ 1.57
MT-ND3P03897 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
MT-ND3P03897 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
MT-ND3P03897 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
MT-ND3P03897 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
MT-ND3P03897 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
MT-ND3P03897 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
MT-ND3P03897 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
MT-ND3P03897 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
MT-ND3P03897 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
MT-ND3P03897 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
MT-ND3P03897 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
MT-ND3P03897 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
MT-ND3P03897 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
MT-ND3P03897 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
MT-ND3P03897 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
MT-ND3P03897 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
MT-ND3P03897 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.84■■□□□ 1.57
MT-ND3P03897 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
MT-ND3P03897 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.84■■□□□ 1.57
MT-ND3P03897 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
MT-ND3P03897 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
MT-ND3P03897 DUX4L13-201ENST00000554103 1267 ntBASIC24.83■■□□□ 1.57
MT-ND3P03897 DUX4L15-201ENST00000611059 1267 ntBASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms