Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DQA2P01906 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DQA2P01906 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.04■■□□□ 1.12
HLA-DQA2P01906 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DQA2P01906 AP004609.3-201ENST00000610705 1884 ntBASIC22.04■■□□□ 1.12
HLA-DQA2P01906 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DQA2P01906 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DQA2P01906 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DQA2P01906 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
HLA-DQA2P01906 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DQA2P01906 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DQA2P01906 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.02■■□□□ 1.12
HLA-DQA2P01906 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
HLA-DQA2P01906 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DQA2P01906 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DQA2P01906 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DQA2P01906 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22■■□□□ 1.11
HLA-DQA2P01906 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DQA2P01906 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
HLA-DQA2P01906 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DQA2P01906 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22■■□□□ 1.11
HLA-DQA2P01906 CHML-204ENST00000638121 920 ntTSL 2 BASIC22■■□□□ 1.11
HLA-DQA2P01906 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22■■□□□ 1.11
HLA-DQA2P01906 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DQA2P01906 LINC01971-201ENST00000617888 1048 ntBASIC21.99■■□□□ 1.11
HLA-DQA2P01906 WHAMMP3-201ENST00000611636 1609 ntBASIC21.98■■□□□ 1.11
HLA-DQA2P01906 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
HLA-DQA2P01906 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
HLA-DQA2P01906 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
HLA-DQA2P01906 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
HLA-DQA2P01906 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DQA2P01906 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
HLA-DQA2P01906 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.97■■□□□ 1.11
HLA-DQA2P01906 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.97■■□□□ 1.11
HLA-DQA2P01906 AC091060.1-201ENST00000623524 1766 ntBASIC21.97■■□□□ 1.11
HLA-DQA2P01906 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
HLA-DQA2P01906 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.96■■□□□ 1.11
HLA-DQA2P01906 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.95■■□□□ 1.1
HLA-DQA2P01906 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DQA2P01906 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
HLA-DQA2P01906 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
HLA-DQA2P01906 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQA2P01906 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQA2P01906 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DQA2P01906 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DQA2P01906 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.92■■□□□ 1.1
HLA-DQA2P01906 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.92■■□□□ 1.1
HLA-DQA2P01906 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
HLA-DQA2P01906 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DQA2P01906 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.92■■□□□ 1.1
HLA-DQA2P01906 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.92■■□□□ 1.1
HLA-DQA2P01906 DUX4L13-201ENST00000554103 1267 ntBASIC21.91■■□□□ 1.1
HLA-DQA2P01906 DUX4L15-201ENST00000611059 1267 ntBASIC21.91■■□□□ 1.1
HLA-DQA2P01906 DUX4L23-201ENST00000615195 1269 ntBASIC21.91■■□□□ 1.1
HLA-DQA2P01906 DUX4L24-201ENST00000617576 1269 ntBASIC21.91■■□□□ 1.1
HLA-DQA2P01906 DUX4L22-201ENST00000618238 1269 ntBASIC21.91■■□□□ 1.1
HLA-DQA2P01906 DUX4L20-201ENST00000619712 1269 ntBASIC21.91■■□□□ 1.1
HLA-DQA2P01906 DUX4L21-201ENST00000622058 1269 ntBASIC21.91■■□□□ 1.1
HLA-DQA2P01906 DUX4L10-201ENST00000622460 1267 ntBASIC21.91■■□□□ 1.1
HLA-DQA2P01906 DUX4L25-201ENST00000624915 1269 ntBASIC21.91■■□□□ 1.1
HLA-DQA2P01906 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DQA2P01906 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DQA2P01906 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DQA2P01906 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DQA2P01906 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DQA2P01906 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DQA2P01906 AC142472.1-201ENST00000612013 1741 ntBASIC21.9■■□□□ 1.1
HLA-DQA2P01906 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DQA2P01906 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HLA-DQA2P01906 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.9■■□□□ 1.1
HLA-DQA2P01906 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DQA2P01906 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DQA2P01906 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.89■■□□□ 1.1
HLA-DQA2P01906 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
HLA-DQA2P01906 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.89■■□□□ 1.1
HLA-DQA2P01906 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DQA2P01906 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DQA2P01906 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.89■■□□□ 1.09
HLA-DQA2P01906 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.89■■□□□ 1.09
HLA-DQA2P01906 AC145676.1-201ENST00000514988 2004 ntBASIC21.89■■□□□ 1.09
HLA-DQA2P01906 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.88■■□□□ 1.09
HLA-DQA2P01906 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HLA-DQA2P01906 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.88■■□□□ 1.09
HLA-DQA2P01906 DUX4L11-201ENST00000611504 1267 ntBASIC21.88■■□□□ 1.09
HLA-DQA2P01906 DUX4L12-201ENST00000614593 1267 ntBASIC21.88■■□□□ 1.09
HLA-DQA2P01906 DUX4L14-201ENST00000621227 1267 ntBASIC21.88■■□□□ 1.09
HLA-DQA2P01906 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.87■■□□□ 1.09
HLA-DQA2P01906 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
HLA-DQA2P01906 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HLA-DQA2P01906 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
HLA-DQA2P01906 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HLA-DQA2P01906 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HLA-DQA2P01906 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HLA-DQA2P01906 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HLA-DQA2P01906 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HLA-DQA2P01906 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
HLA-DQA2P01906 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.86■■□□□ 1.09
HLA-DQA2P01906 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HLA-DQA2P01906 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.86■■□□□ 1.09
HLA-DQA2P01906 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms