Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
DDX58O95786 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
DDX58O95786 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
DDX58O95786 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
DDX58O95786 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.47■■■□□ 2.63
DDX58O95786 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
DDX58O95786 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
DDX58O95786 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.46■■■□□ 2.63
DDX58O95786 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
DDX58O95786 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
DDX58O95786 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.46■■■□□ 2.63
DDX58O95786 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
DDX58O95786 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
DDX58O95786 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
DDX58O95786 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.45■■■□□ 2.63
DDX58O95786 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.44■■■□□ 2.62
DDX58O95786 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
DDX58O95786 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
DDX58O95786 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.42■■■□□ 2.62
DDX58O95786 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
DDX58O95786 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.42■■■□□ 2.62
DDX58O95786 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
DDX58O95786 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.41■■■□□ 2.62
DDX58O95786 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
DDX58O95786 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
DDX58O95786 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
DDX58O95786 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.4■■■□□ 2.62
DDX58O95786 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
DDX58O95786 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
DDX58O95786 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.4■■■□□ 2.62
DDX58O95786 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.4■■■□□ 2.62
DDX58O95786 AC012354.3-201ENST00000623734 483 ntBASIC31.4■■■□□ 2.62
DDX58O95786 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
DDX58O95786 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.4■■■□□ 2.62
DDX58O95786 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
DDX58O95786 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
DDX58O95786 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
DDX58O95786 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
DDX58O95786 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
DDX58O95786 AL359504.2-201ENST00000605506 1601 ntBASIC31.39■■■□□ 2.62
DDX58O95786 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
DDX58O95786 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.39■■■□□ 2.62
DDX58O95786 RP9P-202ENST00000450133 1212 ntBASIC31.39■■■□□ 2.62
DDX58O95786 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
DDX58O95786 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
DDX58O95786 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
DDX58O95786 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
DDX58O95786 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.38■■■□□ 2.61
DDX58O95786 MIR3960-201ENST00000583311 91 ntBASIC31.38■■■□□ 2.61
DDX58O95786 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
DDX58O95786 KRT18P60-201ENST00000312876 1297 ntBASIC31.37■■■□□ 2.61
DDX58O95786 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
DDX58O95786 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
DDX58O95786 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
DDX58O95786 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.36■■■□□ 2.61
DDX58O95786 AC133552.2-201ENST00000619106 1032 ntBASIC31.36■■■□□ 2.61
DDX58O95786 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
DDX58O95786 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
DDX58O95786 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
DDX58O95786 AC009831.1-201ENST00000580420 1582 ntBASIC31.35■■■□□ 2.61
DDX58O95786 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
DDX58O95786 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.35■■■□□ 2.61
DDX58O95786 BX255925.1-201ENST00000566954 1854 ntBASIC31.35■■■□□ 2.61
DDX58O95786 AC142086.6-201ENST00000621154 1765 ntBASIC31.35■■■□□ 2.61
DDX58O95786 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
DDX58O95786 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
DDX58O95786 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
DDX58O95786 AC093536.1-201ENST00000569153 554 ntBASIC31.33■■■□□ 2.61
DDX58O95786 AC026202.3-201ENST00000600805 1127 ntBASIC31.33■■■□□ 2.61
DDX58O95786 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
DDX58O95786 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
DDX58O95786 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
DDX58O95786 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
DDX58O95786 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.31■■■□□ 2.6
DDX58O95786 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
DDX58O95786 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
DDX58O95786 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.3■■■□□ 2.6
DDX58O95786 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
DDX58O95786 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DDX58O95786 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.3■■■□□ 2.6
DDX58O95786 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DDX58O95786 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.3■■■□□ 2.6
DDX58O95786 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DDX58O95786 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.3■■■□□ 2.6
DDX58O95786 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
DDX58O95786 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
DDX58O95786 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
DDX58O95786 AL449106.1-201ENST00000608517 1980 ntBASIC31.29■■■□□ 2.6
DDX58O95786 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
DDX58O95786 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
DDX58O95786 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
DDX58O95786 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
DDX58O95786 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
DDX58O95786 AL592293.1-201ENST00000502889 1188 ntBASIC31.28■■■□□ 2.6
DDX58O95786 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.28■■■□□ 2.6
DDX58O95786 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
DDX58O95786 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
DDX58O95786 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
DDX58O95786 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.28■■■□□ 2.6
DDX58O95786 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms