Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
TBC1D4O60343 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TBC1D4O60343 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TBC1D4O60343 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TBC1D4O60343 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.36■■□□□ 1.81
TBC1D4O60343 AL592293.1-201ENST00000502889 1188 ntBASIC26.36■■□□□ 1.81
TBC1D4O60343 AC129492.7-201ENST00000622992 756 ntBASIC26.36■■□□□ 1.81
TBC1D4O60343 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
TBC1D4O60343 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TBC1D4O60343 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TBC1D4O60343 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TBC1D4O60343 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
TBC1D4O60343 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
TBC1D4O60343 RP9P-202ENST00000450133 1212 ntBASIC26.35■■□□□ 1.81
TBC1D4O60343 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.35■■□□□ 1.81
TBC1D4O60343 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TBC1D4O60343 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
TBC1D4O60343 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.35■■□□□ 1.81
TBC1D4O60343 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TBC1D4O60343 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TBC1D4O60343 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TBC1D4O60343 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TBC1D4O60343 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
TBC1D4O60343 RAP2CP1-202ENST00000605179 643 ntBASIC26.33■■□□□ 1.81
TBC1D4O60343 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
TBC1D4O60343 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TBC1D4O60343 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TBC1D4O60343 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TBC1D4O60343 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.33■■□□□ 1.81
TBC1D4O60343 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
TBC1D4O60343 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
TBC1D4O60343 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.32■■□□□ 1.8
TBC1D4O60343 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.32■■□□□ 1.8
TBC1D4O60343 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.32■■□□□ 1.8
TBC1D4O60343 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.32■■□□□ 1.8
TBC1D4O60343 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
TBC1D4O60343 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.31■■□□□ 1.8
TBC1D4O60343 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.31■■□□□ 1.8
TBC1D4O60343 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
TBC1D4O60343 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TBC1D4O60343 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.3■■□□□ 1.8
TBC1D4O60343 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TBC1D4O60343 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TBC1D4O60343 AC093536.1-201ENST00000569153 554 ntBASIC26.3■■□□□ 1.8
TBC1D4O60343 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TBC1D4O60343 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TBC1D4O60343 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
TBC1D4O60343 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TBC1D4O60343 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TBC1D4O60343 DRD5P2-201ENST00000421395 2012 ntBASIC26.29■■□□□ 1.8
TBC1D4O60343 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TBC1D4O60343 WHAMMP3-201ENST00000611636 1609 ntBASIC26.28■■□□□ 1.8
TBC1D4O60343 AC139426.1-201ENST00000568218 2529 ntBASIC26.28■■□□□ 1.8
TBC1D4O60343 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
TBC1D4O60343 MIR3960-201ENST00000583311 91 ntBASIC26.28■■□□□ 1.8
TBC1D4O60343 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.28■■□□□ 1.8
TBC1D4O60343 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TBC1D4O60343 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
TBC1D4O60343 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.27■■□□□ 1.8
TBC1D4O60343 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.27■■□□□ 1.8
TBC1D4O60343 AL359504.2-201ENST00000605506 1601 ntBASIC26.27■■□□□ 1.8
TBC1D4O60343 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.27■■□□□ 1.8
TBC1D4O60343 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TBC1D4O60343 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
TBC1D4O60343 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
TBC1D4O60343 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
TBC1D4O60343 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TBC1D4O60343 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
TBC1D4O60343 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.24■■□□□ 1.79
TBC1D4O60343 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TBC1D4O60343 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TBC1D4O60343 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.23■■□□□ 1.79
TBC1D4O60343 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TBC1D4O60343 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
TBC1D4O60343 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.22■■□□□ 1.79
TBC1D4O60343 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TBC1D4O60343 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.22■■□□□ 1.79
TBC1D4O60343 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TBC1D4O60343 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TBC1D4O60343 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.22■■□□□ 1.79
TBC1D4O60343 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
TBC1D4O60343 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
TBC1D4O60343 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
TBC1D4O60343 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.79
TBC1D4O60343 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TBC1D4O60343 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TBC1D4O60343 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
TBC1D4O60343 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.79
TBC1D4O60343 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.2■■□□□ 1.78
TBC1D4O60343 DUX4L18-201ENST00000553347 1267 ntBASIC26.2■■□□□ 1.78
TBC1D4O60343 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TBC1D4O60343 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.2■■□□□ 1.78
TBC1D4O60343 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.19■■□□□ 1.78
TBC1D4O60343 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.19■■□□□ 1.78
TBC1D4O60343 SPCS2P3-201ENST00000500401 656 ntBASIC26.19■■□□□ 1.78
TBC1D4O60343 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TBC1D4O60343 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TBC1D4O60343 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
TBC1D4O60343 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
TBC1D4O60343 DUX4L9-201ENST00000449051 1259 ntBASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms