Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.51■■□□□ 1.835e-7■■■■□ 21.7
NKRFO15226 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.11■□□□□ 0.015e-7■■■■□ 21.7
NKRFO15226 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.035e-7■■■■□ 21.7
NKRFO15226 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.041e-6■■■■□ 21.7
NKRFO15226 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.041e-6■■■■□ 21.7
NKRFO15226 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.121e-6■■■■□ 21.7
NKRFO15226 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.95■□□□□ 0.37e-9■■■■□ 21.7
NKRFO15226 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.177e-9■■■■□ 21.7
NKRFO15226 KDELR2-205ENST00000463747 376 ntTSL 512.51□□□□□ -0.417e-9■■■■□ 21.7
NKRFO15226 KDELR2-202ENST00000382267 583 ntTSL 411.25□□□□□ -0.617e-9■■■■□ 21.7
NKRFO15226 KDELR2-204ENST00000462052 382 ntTSL 29.33□□□□□ -0.927e-9■■■■□ 21.7
NKRFO15226 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC9.16□□□□□ -0.947e-9■■■■□ 21.7
NKRFO15226 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.12e-11■■■■□ 21.6
NKRFO15226 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.99□□□□□ -0.332e-11■■■■□ 21.6
NKRFO15226 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.91■■□□□ 1.96e-7■■■■□ 21.6
NKRFO15226 KLF3-AS1-201ENST00000436901 1896 ntTSL 224.46■■□□□ 1.516e-7■■■■□ 21.6
NKRFO15226 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.68■□□□□ 0.266e-7■■■■□ 21.6
NKRFO15226 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.68■□□□□ 0.266e-7■■■■□ 21.6
NKRFO15226 KLF3-AS1-206ENST00000610668 685 ntTSL 214.07□□□□□ -0.166e-7■■■■□ 21.6
NKRFO15226 KLF3-AS1-205ENST00000507091 642 ntTSL 3 BASIC13.36□□□□□ -0.276e-7■■■■□ 21.6
NKRFO15226 GALNT1-206ENST00000591924 542 ntTSL 325.74■■□□□ 1.715e-6■■■■□ 21.6
NKRFO15226 GALNT1-202ENST00000586725 272 ntTSL 516.32■□□□□ 0.25e-6■■■■□ 21.6
NKRFO15226 MIR4713HG-201ENST00000559909 561 ntTSL 4 BASIC13.03□□□□□ -0.325e-7■■■■□ 21.6
NKRFO15226 NEU4-216ENST00000494678 491 ntTSL 422.14■■□□□ 1.132e-7■■■■□ 21.5
NKRFO15226 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.19e-7■■■■□ 21.5
NKRFO15226 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.649e-7■■■■□ 21.5
NKRFO15226 COL27A1-207ENST00000494090 5329 ntTSL 1 (best)19.82■□□□□ 0.764e-6■■■■□ 21.4
NKRFO15226 CSNK1G2-204ENST00000589350 780 ntTSL 519.7■□□□□ 0.742e-6■■■■□ 21.4
NKRFO15226 CSNK1G2-210ENST00000614707 249 ntTSL 215.97■□□□□ 0.152e-6■■■■□ 21.4
NKRFO15226 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.273e-6■■■■□ 21.4
NKRFO15226 ZADH2-204ENST00000582437 671 ntTSL 511.99□□□□□ -0.493e-6■■■■□ 21.4
NKRFO15226 ZADH2-203ENST00000581620 520 ntTSL 49.59□□□□□ -0.873e-6■■■■□ 21.4
NKRFO15226 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.236e-12■■■■□ 21.3
NKRFO15226 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.022e-7■■■■□ 21.3
NKRFO15226 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.72■■□□□ 1.391e-6■■■■□ 21.3
NKRFO15226 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.79■□□□□ 0.61e-6■■■■□ 21.3
NKRFO15226 TPT1-AS1-220ENST00000524062 2285 ntTSL 218.44■□□□□ 0.541e-6■■■■□ 21.3
NKRFO15226 TPT1-AS1-205ENST00000517509 3456 ntTSL 2 BASIC13.23□□□□□ -0.291e-6■■■■□ 21.3
NKRFO15226 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC10.72□□□□□ -0.691e-6■■■■□ 21.3
NKRFO15226 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC9.31□□□□□ -0.921e-6■■■■□ 21.3
NKRFO15226 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC8.91□□□□□ -0.981e-6■■■■□ 21.3
NKRFO15226 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.62□□□□□ -1.191e-6■■■■□ 21.3
NKRFO15226 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.345e-7■■■■□ 21.1
NKRFO15226 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.83■□□□□ 0.126e-7■■■■□ 21.1
NKRFO15226 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.471e-7■■■■□ 21.1
NKRFO15226 PCNX1-206ENST00000554292 402 ntTSL 432.64■■■□□ 2.823e-6■■■■□ 21
NKRFO15226 TMEM86B-203ENST00000589190 1508 ntTSL 223.02■■□□□ 1.283e-6■■■■□ 21
NKRFO15226 TMEM86B-202ENST00000585416 2034 nt21.49■■□□□ 1.033e-6■■■■□ 21
NKRFO15226 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.26■□□□□ 0.993e-6■■■■□ 21
NKRFO15226 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.663e-6■■■■□ 21
NKRFO15226 DNAJB6-212ENST00000465908 694 ntTSL 318.54■□□□□ 0.563e-6■■■■□ 21
NKRFO15226 BRD3-204ENST00000433041 599 ntTSL 318.37■□□□□ 0.533e-6■■■■□ 21
NKRFO15226 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.27■□□□□ 0.523e-6■■■■□ 21
NKRFO15226 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.53e-6■■■■□ 21
NKRFO15226 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.463e-6■■■■□ 21
NKRFO15226 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.79■□□□□ 0.443e-6■■■■□ 21
NKRFO15226 PCNX1-209ENST00000554879 4431 ntTSL 1 (best)17.79■□□□□ 0.443e-6■■■■□ 21
NKRFO15226 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.85■□□□□ 0.293e-6■■■■□ 21
NKRFO15226 AC010327.5-201ENST00000586923 3061 ntBASIC16.21■□□□□ 0.193e-6■■■■□ 21
NKRFO15226 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.2■□□□□ 0.028e-17■■■■□ 21
NKRFO15226 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.013e-6■■■■□ 21
NKRFO15226 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.54□□□□□ -0.083e-6■■■■□ 21
NKRFO15226 ENGASE-201ENST00000300682 4626 ntTSL 513.98□□□□□ -0.173e-6■■■■□ 21
NKRFO15226 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.123e-6■■■■□ 21
NKRFO15226 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.61■■□□□ 1.856e-10■■■■□ 21
NKRFO15226 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.516e-10■■■■□ 21
NKRFO15226 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.48■■□□□ 1.196e-10■■■■□ 21
NKRFO15226 SAMD1-201ENST00000269724 750 ntAPPRIS ALT2 TSL 522.01■■□□□ 1.113e-7■■■■□ 21
NKRFO15226 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.39■■□□□ 1.016e-10■■■■□ 21
NKRFO15226 FOSL1-205ENST00000534222 584 ntTSL 315.71■□□□□ 0.116e-10■■■■□ 21
NKRFO15226 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.472e-6■■■■□ 20.9
NKRFO15226 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.782e-6■■■■□ 20.9
NKRFO15226 ZC3H3-202ENST00000528401 546 ntTSL 320.75■□□□□ 0.917e-9■■■■□ 20.9
NKRFO15226 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.478e-8■■■■□ 20.9
NKRFO15226 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.138e-8■■■■□ 20.9
NKRFO15226 SLC17A9-207ENST00000488738 3992 ntTSL 213.91□□□□□ -0.188e-8■■■■□ 20.9
NKRFO15226 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.82■□□□□ 0.441e-6■■■■□ 20.9
NKRFO15226 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.426e-7■■■■□ 20.8
NKRFO15226 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.27■■■□□ 2.443e-6■■■■□ 20.8
NKRFO15226 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.993e-6■■■■□ 20.8
NKRFO15226 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.6■□□□□ 0.893e-6■■■■□ 20.8
NKRFO15226 SLC9A3R2-209ENST00000567504 578 ntTSL 318.89■□□□□ 0.613e-6■■■■□ 20.8
NKRFO15226 SLC9A3R2-207ENST00000565855 759 ntTSL 218.45■□□□□ 0.543e-6■■■■□ 20.8
NKRFO15226 SLC9A3R2-203ENST00000561844 738 ntTSL 316.45■□□□□ 0.223e-6■■■■□ 20.8
NKRFO15226 SLC9A3R2-206ENST00000565086 685 ntTSL 315.85■□□□□ 0.133e-6■■■■□ 20.8
NKRFO15226 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC14.97□□□□□ -0.013e-6■■■■□ 20.8
NKRFO15226 BAIAP2-216ENST00000574027 604 ntTSL 417.33■□□□□ 0.361e-6■■■■□ 20.8
NKRFO15226 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.862e-6■■■■□ 20.8
NKRFO15226 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.342e-7■■■■□ 20.8
NKRFO15226 PTDSS2-212ENST00000531520 890 ntTSL 321.72■■□□□ 1.072e-7■■■■□ 20.8
NKRFO15226 PTDSS2-213ENST00000532614 437 ntTSL 315.36■□□□□ 0.052e-7■■■■□ 20.8
NKRFO15226 PTDSS2-205ENST00000526878 3134 ntTSL 213.04□□□□□ -0.322e-7■■■■□ 20.8
NKRFO15226 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC9.04□□□□□ -0.962e-6■■■■□ 20.8
NKRFO15226 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.38■■□□□ 1.499e-8■■■■□ 20.7
NKRFO15226 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.27■■□□□ 1.169e-8■■■■□ 20.7
NKRFO15226 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.03■■□□□ 1.129e-8■■■■□ 20.7
NKRFO15226 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.21■□□□□ 0.839e-8■■■■□ 20.7
NKRFO15226 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.749e-8■■■■□ 20.7
NKRFO15226 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.69e-8■■■■□ 20.7
NKRFO15226 DMPK-206ENST00000588522 2920 ntTSL 518.1■□□□□ 0.499e-8■■■■□ 20.7
Retrieved 100 of 9,198 protein–RNA pairs in 152.1 ms