Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MSGN1A6NI15 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.39■□□□□ 0.86
MSGN1A6NI15 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
MSGN1A6NI15 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MSGN1A6NI15 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MSGN1A6NI15 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.39■□□□□ 0.85
MSGN1A6NI15 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.39■□□□□ 0.85
MSGN1A6NI15 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.39■□□□□ 0.85
MSGN1A6NI15 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
MSGN1A6NI15 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MSGN1A6NI15 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MSGN1A6NI15 AC092803.2-201ENST00000564287 1899 ntBASIC20.39■□□□□ 0.85
MSGN1A6NI15 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MSGN1A6NI15 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
MSGN1A6NI15 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
MSGN1A6NI15 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
MSGN1A6NI15 AC044849.2-201ENST00000606596 710 ntBASIC20.38■□□□□ 0.85
MSGN1A6NI15 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MSGN1A6NI15 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MSGN1A6NI15 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.37■□□□□ 0.85
MSGN1A6NI15 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.37■□□□□ 0.85
MSGN1A6NI15 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MSGN1A6NI15 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSGN1A6NI15 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSGN1A6NI15 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MSGN1A6NI15 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
MSGN1A6NI15 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MSGN1A6NI15 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MSGN1A6NI15 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSGN1A6NI15 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.34■□□□□ 0.85
MSGN1A6NI15 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MSGN1A6NI15 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSGN1A6NI15 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSGN1A6NI15 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSGN1A6NI15 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSGN1A6NI15 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.34■□□□□ 0.85
MSGN1A6NI15 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MSGN1A6NI15 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSGN1A6NI15 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.33■□□□□ 0.85
MSGN1A6NI15 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSGN1A6NI15 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MSGN1A6NI15 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
MSGN1A6NI15 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MSGN1A6NI15 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
MSGN1A6NI15 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MSGN1A6NI15 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
MSGN1A6NI15 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MSGN1A6NI15 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSGN1A6NI15 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSGN1A6NI15 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MSGN1A6NI15 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MSGN1A6NI15 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.32■□□□□ 0.84
MSGN1A6NI15 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.32■□□□□ 0.84
MSGN1A6NI15 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
MSGN1A6NI15 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSGN1A6NI15 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSGN1A6NI15 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MSGN1A6NI15 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.31■□□□□ 0.84
MSGN1A6NI15 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSGN1A6NI15 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MSGN1A6NI15 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
MSGN1A6NI15 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MSGN1A6NI15 ERN1-208ENST00000606895 2068 ntBASIC20.3■□□□□ 0.84
MSGN1A6NI15 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.3■□□□□ 0.84
MSGN1A6NI15 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSGN1A6NI15 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MSGN1A6NI15 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MSGN1A6NI15 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
MSGN1A6NI15 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSGN1A6NI15 AC135983.2-203ENST00000454486 1613 ntBASIC20.29■□□□□ 0.84
MSGN1A6NI15 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSGN1A6NI15 RPS2P35-201ENST00000443417 897 ntBASIC20.29■□□□□ 0.84
MSGN1A6NI15 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSGN1A6NI15 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSGN1A6NI15 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSGN1A6NI15 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSGN1A6NI15 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSGN1A6NI15 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSGN1A6NI15 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSGN1A6NI15 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.28■□□□□ 0.84
MSGN1A6NI15 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MSGN1A6NI15 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MSGN1A6NI15 LINC00273-201ENST00000539813 1452 ntBASIC20.27■□□□□ 0.84
MSGN1A6NI15 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.27■□□□□ 0.84
MSGN1A6NI15 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSGN1A6NI15 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
MSGN1A6NI15 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MSGN1A6NI15 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSGN1A6NI15 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
MSGN1A6NI15 AC018358.1-201ENST00000631079 1402 ntBASIC20.26■□□□□ 0.83
MSGN1A6NI15 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSGN1A6NI15 WHAMMP2-203ENST00000563942 1603 ntBASIC20.25■□□□□ 0.83
MSGN1A6NI15 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.25■□□□□ 0.83
MSGN1A6NI15 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSGN1A6NI15 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.25■□□□□ 0.83
MSGN1A6NI15 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MSGN1A6NI15 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.24■□□□□ 0.83
MSGN1A6NI15 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MSGN1A6NI15 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.24■□□□□ 0.83
MSGN1A6NI15 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms