Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SH3D21A4FU49 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SH3D21A4FU49 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
SH3D21A4FU49 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
SH3D21A4FU49 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SH3D21A4FU49 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
SH3D21A4FU49 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SH3D21A4FU49 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SH3D21A4FU49 AC020928.2-201ENST00000588717 2197 ntBASIC22.79■■□□□ 1.24
SH3D21A4FU49 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SH3D21A4FU49 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
SH3D21A4FU49 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
SH3D21A4FU49 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.78■■□□□ 1.24
SH3D21A4FU49 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SH3D21A4FU49 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SH3D21A4FU49 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SH3D21A4FU49 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SH3D21A4FU49 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SH3D21A4FU49 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SH3D21A4FU49 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.77■■□□□ 1.24
SH3D21A4FU49 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SH3D21A4FU49 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
SH3D21A4FU49 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.76■■□□□ 1.23
SH3D21A4FU49 AC018358.1-201ENST00000631079 1402 ntBASIC22.76■■□□□ 1.23
SH3D21A4FU49 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SH3D21A4FU49 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
SH3D21A4FU49 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
SH3D21A4FU49 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.76■■□□□ 1.23
SH3D21A4FU49 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SH3D21A4FU49 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SH3D21A4FU49 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.75■■□□□ 1.23
SH3D21A4FU49 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.75■■□□□ 1.23
SH3D21A4FU49 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.75■■□□□ 1.23
SH3D21A4FU49 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SH3D21A4FU49 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
SH3D21A4FU49 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.75■■□□□ 1.23
SH3D21A4FU49 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.75■■□□□ 1.23
SH3D21A4FU49 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SH3D21A4FU49 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
SH3D21A4FU49 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SH3D21A4FU49 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SH3D21A4FU49 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
SH3D21A4FU49 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SH3D21A4FU49 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SH3D21A4FU49 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.74■■□□□ 1.23
SH3D21A4FU49 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SH3D21A4FU49 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
SH3D21A4FU49 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SH3D21A4FU49 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
SH3D21A4FU49 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
SH3D21A4FU49 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SH3D21A4FU49 LINC00273-201ENST00000539813 1452 ntBASIC22.73■■□□□ 1.23
SH3D21A4FU49 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SH3D21A4FU49 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.72■■□□□ 1.23
SH3D21A4FU49 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.72■■□□□ 1.23
SH3D21A4FU49 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.72■■□□□ 1.23
SH3D21A4FU49 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SH3D21A4FU49 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.72■■□□□ 1.23
SH3D21A4FU49 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SH3D21A4FU49 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.71■■□□□ 1.23
SH3D21A4FU49 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SH3D21A4FU49 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
SH3D21A4FU49 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
SH3D21A4FU49 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.71■■□□□ 1.23
SH3D21A4FU49 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SH3D21A4FU49 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SH3D21A4FU49 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.69■■□□□ 1.22
SH3D21A4FU49 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.68■■□□□ 1.22
SH3D21A4FU49 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SH3D21A4FU49 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.68■■□□□ 1.22
SH3D21A4FU49 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.68■■□□□ 1.22
SH3D21A4FU49 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SH3D21A4FU49 DUSP8P4-201ENST00000399538 1761 ntBASIC22.68■■□□□ 1.22
SH3D21A4FU49 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.67■■□□□ 1.22
SH3D21A4FU49 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SH3D21A4FU49 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.67■■□□□ 1.22
SH3D21A4FU49 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.67■■□□□ 1.22
SH3D21A4FU49 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.67■■□□□ 1.22
SH3D21A4FU49 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.67■■□□□ 1.22
SH3D21A4FU49 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.67■■□□□ 1.22
SH3D21A4FU49 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
SH3D21A4FU49 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
SH3D21A4FU49 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SH3D21A4FU49 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SH3D21A4FU49 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.66■■□□□ 1.22
SH3D21A4FU49 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SH3D21A4FU49 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.66■■□□□ 1.22
SH3D21A4FU49 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SH3D21A4FU49 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.65■■□□□ 1.22
SH3D21A4FU49 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3D21A4FU49 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SH3D21A4FU49 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SH3D21A4FU49 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SH3D21A4FU49 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.65■■□□□ 1.22
SH3D21A4FU49 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SH3D21A4FU49 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SH3D21A4FU49 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3D21A4FU49 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3D21A4FU49 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SH3D21A4FU49 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms