Protein–RNA interactions for Protein: A0A0J9YX20

TRBV7-6, T-cell receptor beta variable 7-6 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-6A0A0J9YX20 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV7-6A0A0J9YX20 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-6A0A0J9YX20 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV7-6A0A0J9YX20 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-6A0A0J9YX20 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-6A0A0J9YX20 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-6A0A0J9YX20 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV7-6A0A0J9YX20 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-6A0A0J9YX20 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV7-6A0A0J9YX20 AC142472.1-201ENST00000612013 1741 ntBASIC15.57■□□□□ 0.08
TRBV7-6A0A0J9YX20 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV7-6A0A0J9YX20 RARA-203ENST00000394086 2008 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV7-6A0A0J9YX20 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-6A0A0J9YX20 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-6A0A0J9YX20 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV7-6A0A0J9YX20 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC15.56■□□□□ 0.08
TRBV7-6A0A0J9YX20 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-6A0A0J9YX20 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-6A0A0J9YX20 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-6A0A0J9YX20 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRBV7-6A0A0J9YX20 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-6A0A0J9YX20 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-6A0A0J9YX20 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV7-6A0A0J9YX20 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV7-6A0A0J9YX20 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRBV7-6A0A0J9YX20 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV7-6A0A0J9YX20 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-6A0A0J9YX20 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV7-6A0A0J9YX20 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBV7-6A0A0J9YX20 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-6A0A0J9YX20 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV7-6A0A0J9YX20 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-6A0A0J9YX20 SETD8P1-201ENST00000623146 1180 ntBASIC15.53■□□□□ 0.08
TRBV7-6A0A0J9YX20 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-6A0A0J9YX20 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV7-6A0A0J9YX20 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-6A0A0J9YX20 AC142381.3-201ENST00000568208 1670 ntBASIC15.53■□□□□ 0.08
TRBV7-6A0A0J9YX20 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRBV7-6A0A0J9YX20 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV7-6A0A0J9YX20 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV7-6A0A0J9YX20 AL391121.1-201ENST00000607967 1349 ntBASIC15.52■□□□□ 0.08
TRBV7-6A0A0J9YX20 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV7-6A0A0J9YX20 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRBV7-6A0A0J9YX20 CEBPA-AS1-201ENST00000592982 2198 ntBASIC15.52■□□□□ 0.07
TRBV7-6A0A0J9YX20 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV7-6A0A0J9YX20 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 WHAMMP2-203ENST00000563942 1603 ntBASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 RARRES2P7-201ENST00000567349 469 ntBASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 ERN1-208ENST00000606895 2068 ntBASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRBV7-6A0A0J9YX20 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-6A0A0J9YX20 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV7-6A0A0J9YX20 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-6A0A0J9YX20 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-6A0A0J9YX20 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-6A0A0J9YX20 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV7-6A0A0J9YX20 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-6A0A0J9YX20 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
TRBV7-6A0A0J9YX20 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV7-6A0A0J9YX20 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-6A0A0J9YX20 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-6A0A0J9YX20 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-6A0A0J9YX20 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-6A0A0J9YX20 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-6A0A0J9YX20 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-6A0A0J9YX20 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRBV7-6A0A0J9YX20 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC15.49■□□□□ 0.07
TRBV7-6A0A0J9YX20 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV7-6A0A0J9YX20 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-6A0A0J9YX20 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-6A0A0J9YX20 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-6A0A0J9YX20 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-6A0A0J9YX20 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TRBV7-6A0A0J9YX20 LINC00273-201ENST00000539813 1452 ntBASIC15.48■□□□□ 0.07
TRBV7-6A0A0J9YX20 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-6A0A0J9YX20 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-6A0A0J9YX20 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-6A0A0J9YX20 EI24-212ENST00000615917 1407 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV7-6A0A0J9YX20 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-6A0A0J9YX20 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV7-6A0A0J9YX20 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRBV7-6A0A0J9YX20 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-6A0A0J9YX20 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-6A0A0J9YX20 AC010501.1-201ENST00000606270 1962 ntBASIC15.47■□□□□ 0.07
TRBV7-6A0A0J9YX20 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-6A0A0J9YX20 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-6A0A0J9YX20 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV7-6A0A0J9YX20 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
TRBV7-6A0A0J9YX20 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC15.46■□□□□ 0.07
TRBV7-6A0A0J9YX20 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV7-6A0A0J9YX20 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV7-6A0A0J9YX20 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms