Protein–RNA interactions for Protein: A0A0C4DH35

IGHV3-35, Immunoglobulin heavy variable 3-35 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-35A0A0C4DH35 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IGHV3-35A0A0C4DH35 HLA-V-202ENST00000446817 847 ntBASIC19.23■□□□□ 0.67
IGHV3-35A0A0C4DH35 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.23■□□□□ 0.67
IGHV3-35A0A0C4DH35 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IGHV3-35A0A0C4DH35 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
IGHV3-35A0A0C4DH35 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IGHV3-35A0A0C4DH35 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
IGHV3-35A0A0C4DH35 AL449106.1-201ENST00000608517 1980 ntBASIC19.22■□□□□ 0.67
IGHV3-35A0A0C4DH35 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IGHV3-35A0A0C4DH35 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IGHV3-35A0A0C4DH35 AC008813.1-201ENST00000536597 885 ntBASIC19.21■□□□□ 0.67
IGHV3-35A0A0C4DH35 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IGHV3-35A0A0C4DH35 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
IGHV3-35A0A0C4DH35 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV3-35A0A0C4DH35 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.2■□□□□ 0.66
IGHV3-35A0A0C4DH35 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV3-35A0A0C4DH35 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.2■□□□□ 0.66
IGHV3-35A0A0C4DH35 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV3-35A0A0C4DH35 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
IGHV3-35A0A0C4DH35 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV3-35A0A0C4DH35 MIR219A2-201ENST00000608502 1504 ntBASIC19.2■□□□□ 0.66
IGHV3-35A0A0C4DH35 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.19■□□□□ 0.66
IGHV3-35A0A0C4DH35 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV3-35A0A0C4DH35 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
IGHV3-35A0A0C4DH35 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IGHV3-35A0A0C4DH35 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IGHV3-35A0A0C4DH35 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IGHV3-35A0A0C4DH35 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.18■□□□□ 0.66
IGHV3-35A0A0C4DH35 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.17■□□□□ 0.66
IGHV3-35A0A0C4DH35 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IGHV3-35A0A0C4DH35 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.17■□□□□ 0.66
IGHV3-35A0A0C4DH35 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.17■□□□□ 0.66
IGHV3-35A0A0C4DH35 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.17■□□□□ 0.66
IGHV3-35A0A0C4DH35 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
IGHV3-35A0A0C4DH35 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGHV3-35A0A0C4DH35 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.16■□□□□ 0.66
IGHV3-35A0A0C4DH35 WHAMMP3-201ENST00000611636 1609 ntBASIC19.16■□□□□ 0.66
IGHV3-35A0A0C4DH35 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.16■□□□□ 0.66
IGHV3-35A0A0C4DH35 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.16■□□□□ 0.66
IGHV3-35A0A0C4DH35 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGHV3-35A0A0C4DH35 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGHV3-35A0A0C4DH35 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGHV3-35A0A0C4DH35 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IGHV3-35A0A0C4DH35 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
IGHV3-35A0A0C4DH35 AP004609.3-201ENST00000610705 1884 ntBASIC19.14■□□□□ 0.65
IGHV3-35A0A0C4DH35 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.14■□□□□ 0.65
IGHV3-35A0A0C4DH35 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.14■□□□□ 0.65
IGHV3-35A0A0C4DH35 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
IGHV3-35A0A0C4DH35 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV3-35A0A0C4DH35 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
IGHV3-35A0A0C4DH35 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
IGHV3-35A0A0C4DH35 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
IGHV3-35A0A0C4DH35 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.13■□□□□ 0.65
IGHV3-35A0A0C4DH35 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
IGHV3-35A0A0C4DH35 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IGHV3-35A0A0C4DH35 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.13■□□□□ 0.65
IGHV3-35A0A0C4DH35 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.12■□□□□ 0.65
IGHV3-35A0A0C4DH35 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-35A0A0C4DH35 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-35A0A0C4DH35 AC148477.6-201ENST00000623746 465 ntBASIC19.12■□□□□ 0.65
IGHV3-35A0A0C4DH35 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.11■□□□□ 0.65
IGHV3-35A0A0C4DH35 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IGHV3-35A0A0C4DH35 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IGHV3-35A0A0C4DH35 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.11■□□□□ 0.65
IGHV3-35A0A0C4DH35 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IGHV3-35A0A0C4DH35 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.11■□□□□ 0.65
IGHV3-35A0A0C4DH35 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.11■□□□□ 0.65
IGHV3-35A0A0C4DH35 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.1■□□□□ 0.65
IGHV3-35A0A0C4DH35 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
IGHV3-35A0A0C4DH35 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IGHV3-35A0A0C4DH35 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IGHV3-35A0A0C4DH35 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IGHV3-35A0A0C4DH35 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.1■□□□□ 0.65
IGHV3-35A0A0C4DH35 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IGHV3-35A0A0C4DH35 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IGHV3-35A0A0C4DH35 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.1■□□□□ 0.65
IGHV3-35A0A0C4DH35 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
IGHV3-35A0A0C4DH35 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IGHV3-35A0A0C4DH35 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IGHV3-35A0A0C4DH35 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IGHV3-35A0A0C4DH35 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IGHV3-35A0A0C4DH35 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IGHV3-35A0A0C4DH35 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.09■□□□□ 0.65
IGHV3-35A0A0C4DH35 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.09■□□□□ 0.65
IGHV3-35A0A0C4DH35 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IGHV3-35A0A0C4DH35 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
IGHV3-35A0A0C4DH35 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.09■□□□□ 0.65
IGHV3-35A0A0C4DH35 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.08■□□□□ 0.65
IGHV3-35A0A0C4DH35 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
IGHV3-35A0A0C4DH35 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
IGHV3-35A0A0C4DH35 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IGHV3-35A0A0C4DH35 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IGHV3-35A0A0C4DH35 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IGHV3-35A0A0C4DH35 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.07■□□□□ 0.64
IGHV3-35A0A0C4DH35 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGHV3-35A0A0C4DH35 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IGHV3-35A0A0C4DH35 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.07■□□□□ 0.64
IGHV3-35A0A0C4DH35 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.07■□□□□ 0.64
IGHV3-35A0A0C4DH35 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
IGHV3-35A0A0C4DH35 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms