Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRAV24A0A0B4J272 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV24A0A0B4J272 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAV24A0A0B4J272 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV24A0A0B4J272 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.74■□□□□ 0.91
TRAV24A0A0B4J272 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAV24A0A0B4J272 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TRAV24A0A0B4J272 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV24A0A0B4J272 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV24A0A0B4J272 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAV24A0A0B4J272 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV24A0A0B4J272 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TRAV24A0A0B4J272 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAV24A0A0B4J272 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
TRAV24A0A0B4J272 AC008813.1-201ENST00000536597 885 ntBASIC20.72■□□□□ 0.91
TRAV24A0A0B4J272 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV24A0A0B4J272 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAV24A0A0B4J272 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV24A0A0B4J272 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV24A0A0B4J272 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV24A0A0B4J272 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV24A0A0B4J272 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV24A0A0B4J272 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV24A0A0B4J272 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV24A0A0B4J272 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TRAV24A0A0B4J272 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV24A0A0B4J272 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV24A0A0B4J272 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV24A0A0B4J272 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV24A0A0B4J272 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV24A0A0B4J272 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV24A0A0B4J272 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV24A0A0B4J272 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV24A0A0B4J272 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV24A0A0B4J272 AC145676.1-201ENST00000514988 2004 ntBASIC20.69■□□□□ 0.9
TRAV24A0A0B4J272 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV24A0A0B4J272 MIR219A2-201ENST00000608502 1504 ntBASIC20.68■□□□□ 0.9
TRAV24A0A0B4J272 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV24A0A0B4J272 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV24A0A0B4J272 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV24A0A0B4J272 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAV24A0A0B4J272 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV24A0A0B4J272 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV24A0A0B4J272 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV24A0A0B4J272 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV24A0A0B4J272 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV24A0A0B4J272 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV24A0A0B4J272 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TRAV24A0A0B4J272 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAV24A0A0B4J272 AC148477.6-201ENST00000623746 465 ntBASIC20.67■□□□□ 0.9
TRAV24A0A0B4J272 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV24A0A0B4J272 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV24A0A0B4J272 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAV24A0A0B4J272 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV24A0A0B4J272 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
TRAV24A0A0B4J272 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV24A0A0B4J272 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV24A0A0B4J272 ABHD17AP4-201ENST00000411545 909 ntBASIC20.66■□□□□ 0.9
TRAV24A0A0B4J272 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV24A0A0B4J272 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRAV24A0A0B4J272 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV24A0A0B4J272 AC092803.2-201ENST00000564287 1899 ntBASIC20.66■□□□□ 0.9
TRAV24A0A0B4J272 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAV24A0A0B4J272 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV24A0A0B4J272 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRAV24A0A0B4J272 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAV24A0A0B4J272 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRAV24A0A0B4J272 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV24A0A0B4J272 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV24A0A0B4J272 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.64■□□□□ 0.9
TRAV24A0A0B4J272 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV24A0A0B4J272 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.64■□□□□ 0.89
TRAV24A0A0B4J272 HLA-V-202ENST00000446817 847 ntBASIC20.64■□□□□ 0.89
TRAV24A0A0B4J272 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAV24A0A0B4J272 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV24A0A0B4J272 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAV24A0A0B4J272 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV24A0A0B4J272 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV24A0A0B4J272 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV24A0A0B4J272 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV24A0A0B4J272 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.63■□□□□ 0.89
TRAV24A0A0B4J272 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAV24A0A0B4J272 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAV24A0A0B4J272 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV24A0A0B4J272 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV24A0A0B4J272 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAV24A0A0B4J272 CR559946.2-201ENST00000623684 991 ntBASIC20.62■□□□□ 0.89
TRAV24A0A0B4J272 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV24A0A0B4J272 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV24A0A0B4J272 DUSP8P4-201ENST00000399538 1761 ntBASIC20.62■□□□□ 0.89
TRAV24A0A0B4J272 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV24A0A0B4J272 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV24A0A0B4J272 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRAV24A0A0B4J272 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV24A0A0B4J272 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV24A0A0B4J272 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TRAV24A0A0B4J272 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.61■□□□□ 0.89
TRAV24A0A0B4J272 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV24A0A0B4J272 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
TRAV24A0A0B4J272 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms