Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 MIR7108-201ENST00000614319 87 ntBASIC21.95■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 AC148477.6-201ENST00000623746 465 ntBASIC21.95■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.95■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.94■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.94■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.94■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.93■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.91■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.91■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.91■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.9■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.9■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.89■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.89■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.88■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.88■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.88■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.88■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 AC142472.1-201ENST00000612013 1741 ntBASIC21.88■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.87■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.87■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.86■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.84■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.84■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 AC091060.1-201ENST00000623524 1766 ntBASIC21.84■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IGKV1D-43A0A0B4J1Z2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.82■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.81■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.81■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.81■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.81■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.81■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.81■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 AL359258.2-201ENST00000564063 1566 ntBASIC21.8■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.8■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.8■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.79■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.79■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.78■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.77■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
IGKV1D-43A0A0B4J1Z2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms