Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV6-8A0A0A6YYG3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV6-8A0A0A6YYG3 DUX4L11-201ENST00000611504 1267 ntBASIC17.14■□□□□ 0.33
TRBV6-8A0A0A6YYG3 DUX4L12-201ENST00000614593 1267 ntBASIC17.14■□□□□ 0.33
TRBV6-8A0A0A6YYG3 DUX4L14-201ENST00000621227 1267 ntBASIC17.14■□□□□ 0.33
TRBV6-8A0A0A6YYG3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV6-8A0A0A6YYG3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-8A0A0A6YYG3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-8A0A0A6YYG3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-8A0A0A6YYG3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRBV6-8A0A0A6YYG3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-8A0A0A6YYG3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-8A0A0A6YYG3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-8A0A0A6YYG3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-8A0A0A6YYG3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 AC145676.1-201ENST00000514988 2004 ntBASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-8A0A0A6YYG3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-8A0A0A6YYG3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-8A0A0A6YYG3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-8A0A0A6YYG3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-8A0A0A6YYG3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRBV6-8A0A0A6YYG3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-8A0A0A6YYG3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-8A0A0A6YYG3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-8A0A0A6YYG3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV6-8A0A0A6YYG3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV6-8A0A0A6YYG3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV6-8A0A0A6YYG3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRBV6-8A0A0A6YYG3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-8A0A0A6YYG3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 ZNRF2P2-203ENST00000454624 420 ntBASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TRBV6-8A0A0A6YYG3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.08■□□□□ 0.33
TRBV6-8A0A0A6YYG3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.08■□□□□ 0.33
TRBV6-8A0A0A6YYG3 AC092803.2-201ENST00000564287 1899 ntBASIC17.08■□□□□ 0.33
TRBV6-8A0A0A6YYG3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV6-8A0A0A6YYG3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TRBV6-8A0A0A6YYG3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TRBV6-8A0A0A6YYG3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV6-8A0A0A6YYG3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRBV6-8A0A0A6YYG3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-8A0A0A6YYG3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-8A0A0A6YYG3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-8A0A0A6YYG3 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV6-8A0A0A6YYG3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-8A0A0A6YYG3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-8A0A0A6YYG3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV6-8A0A0A6YYG3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-8A0A0A6YYG3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRBV6-8A0A0A6YYG3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV6-8A0A0A6YYG3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-8A0A0A6YYG3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRBV6-8A0A0A6YYG3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-8A0A0A6YYG3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.06■□□□□ 0.32
TRBV6-8A0A0A6YYG3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.06■□□□□ 0.32
TRBV6-8A0A0A6YYG3 AC148477.6-201ENST00000623746 465 ntBASIC17.06■□□□□ 0.32
TRBV6-8A0A0A6YYG3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-8A0A0A6YYG3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-8A0A0A6YYG3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-8A0A0A6YYG3 MIR219A2-201ENST00000608502 1504 ntBASIC17.06■□□□□ 0.32
TRBV6-8A0A0A6YYG3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV6-8A0A0A6YYG3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-8A0A0A6YYG3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-8A0A0A6YYG3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRBV6-8A0A0A6YYG3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-8A0A0A6YYG3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-8A0A0A6YYG3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-8A0A0A6YYG3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV6-8A0A0A6YYG3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-8A0A0A6YYG3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-8A0A0A6YYG3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 DUSP8P4-201ENST00000399538 1761 ntBASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRBV6-8A0A0A6YYG3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms