Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
THUMPD1Q9NXG2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 KRT17P2-201ENST00000300992 1314 ntBASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 AC008550.1-201ENST00000511500 884 ntBASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 AL512604.3-201ENST00000569583 964 ntBASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 AC093010.1-201ENST00000473625 1624 ntBASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THUMPD1Q9NXG2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 AP006294.2-201ENST00000641667 209 ntBASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THUMPD1Q9NXG2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 AC007663.1-201ENST00000438948 1240 ntBASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 AC128688.1-201ENST00000487626 519 ntBASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
THUMPD1Q9NXG2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms