Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 AC004817.3-201ENST00000602957 2129 ntBASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ZFYVE28Q9HCC9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 AL157384.1-201ENST00000445995 2473 ntBASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 SIGLEC16-201ENST00000599858 1437 ntBASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZFYVE28Q9HCC9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 CEND1P1-201ENST00000451006 455 ntBASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 AL589182.2-201ENST00000619332 1049 ntBASIC20.58■□□□□ 0.89
ZFYVE28Q9HCC9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZFYVE28Q9HCC9 ELL2P1-201ENST00000413990 1906 ntBASIC20.58■□□□□ 0.88
ZFYVE28Q9HCC9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.58■□□□□ 0.88
ZFYVE28Q9HCC9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZFYVE28Q9HCC9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZFYVE28Q9HCC9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZFYVE28Q9HCC9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZFYVE28Q9HCC9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
ZFYVE28Q9HCC9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.58■□□□□ 0.88
ZFYVE28Q9HCC9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 VN2R19P-201ENST00000442399 1052 ntBASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.57■□□□□ 0.88
ZFYVE28Q9HCC9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms